Mannheimia haemolytica USDA-ARS-USMARC-185: D648_12430
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Entry
D648_12430 CDS
T02522
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
mht
Mannheimia haemolytica USDA-ARS-USMARC-185
Pathway
mht03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mht00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
D648_12430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mht03400
]
D648_12430
Enzymes [BR:
mht01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
D648_12430
DNA repair and recombination proteins [BR:
mht03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
D648_12430
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D648_12430
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
D648_12430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Kinesin_assoc
Motif
Other DBs
NCBI-ProteinID:
AGI35247
LinkDB
All DBs
Position
complement(1309633..1311180)
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AA seq
515 aa
AA seq
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MSDKFSFFFYDYESFGVSPALDRPAQFAGIRTDADFNIIGEPVMFFCKQTPDYLPSPEAV
MVTGITPQQCNAEGVSEPEFAARIHAEFSRANTCTIGYNNIRYDDEMTRYTFFRNFYDPY
EYSWKNGNSRWDLLDLVRACYALRPDGIEWPTDETGMPSFKLENLTKANGIAHENAHDAM
SDVYATIAMAKLIKQKQPKLFDFFFNLRSKKEVEKLIDTGEMTPLVHVSGMLGNYRGNTA
WVVPLAWHSTNQNAVIVCDLSGDMNGLLTENAEVLRQRLYTKRDELAENELPVPLKLVHI
NKCPILAPAKTLLPENAERLGIDRALCLENLKTLKAQKSLIREKVIEIFNEERTFEPSTN
VETTLYDGFFSPADKNNMAILRTLPPEDLANHGLKFEDPRVEALLFHYRARHYPQTLSRA
EQIKWQKHCNQQIEAKAAQFAQSIDDLFQQHHDNPEKVKLLENLTAYAEQISQQQAVIYR
QNVAKDEKLLSELNRVAEQPLDKTEKLKMLKELIK
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataaattctcttttttcttttacgattatgaaagtttcggcgtgagtccggcg
ttagatcgtccggcacaatttgccggtattcgaaccgatgcggattttaatattatcggt
gaaccggtaatgtttttttgtaagcaaacgccggattatttacccagccccgaagcggtg
atggttaccgggattacaccgcaacaatgtaacgctgaaggtgtatctgagccggaattt
gcagcccgaattcacgctgaatttagccgagcgaatacttgtactatcggttataacaat
attcgttatgatgatgagatgacccgttataccttcttccgcaatttttacgatccttac
gaatatagctggaaaaacggaaattctcgttgggacttgttagatttagtccgtgcctgt
tatgcgttaagacctgatggtattgaatggccaacagatgaaaccggtatgccaagtttt
aaattggaaaacctcaccaaagccaatggcattgcccatgaaaatgcacacgatgcgatg
tctgatgtgtatgccaccatcgcaatggcaaaattaattaagcaaaaacagccaaagttg
ttcgattttttctttaatttacgcagtaaaaaagaagtagagaagttaattgacactggt
gaaatgacaccgcttgtgcacgtttccggtatgctgggcaactatcgaggaaataccgct
tgggttgtgccactggcttggcactcaactaatcaaaatgccgtaattgtgtgtgattta
tcgggcgatatgaatggcttattgactgaaaatgcagaggttttacgtcagcgtttatac
accaaacgagatgaattagccgaaaatgagttacctgtgccgttaaaattagtgcatatt
aataaatgcccgattttagcaccggcaaaaaccttactgcctgaaaatgcagaacgttta
ggcatagacagagctttatgtttggaaaatttgaaaactttaaaagcacagaaatcgctg
attcgggaaaaagtgattgaaatttttaatgaagaacgcacgtttgagccttcgaccaat
gtagaaaccactttgtatgacggctttttctcgcctgcggataaaaataatatggcgatt
ttacgcacgctaccgcctgaagatttagccaaccacggcttgaaatttgaagaccctcga
gtagaggcgttactattccattaccgagcaaggcactatccacaaacactcagtcgagcc
gagcagatcaaatggcagaaacattgcaaccagcaaattgaggcaaaagcagcgcagttc
gcccaatcgattgacgacttgttccaacaacatcacgacaacccggaaaaggtaaaatta
ttagaaaatttgaccgcttacgccgagcagatttcgcaacaacaagcggtcatttatcgt
caaaatgttgcaaaagatgaaaaattgctgagcgagcttaacagagtagcggaacagccc
ctagataaaaccgaaaagctcaagatgttaaaagagttgattaaatga
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