Mannheimia haemolytica USDA-ARS-USMARC-185: D648_12520
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Entry
D648_12520 CDS
T02522
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
mht
Mannheimia haemolytica USDA-ARS-USMARC-185
Pathway
mht03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mht00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D648_12520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mht03400
]
D648_12520
DNA repair and recombination proteins [BR:
mht03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D648_12520
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
D648_12520
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
EAD9
UB2H
DUF5683
Mu_Gam-Sipho_Gp157-TOTE
DUF87
Motif
Other DBs
NCBI-ProteinID:
AGI35255
LinkDB
All DBs
Position
complement(1302833..1304851)
Genome browser
AA seq
672 aa
AA seq
DB search
MSKQGKPFILHSPFKPSGDQPSAIAKLTEGLNDGLAHQTLLGVTGSGKTFTIANVIAKLN
RPAMVLAPNKTLAAQLYAEMKAFFPENAVEYFVSYYDYYQPEAYVPASDTFIEKDASINE
QIEQMRLSATKSFLERRDTIVVASVSAIYGLGDVDAYMQMMLHLQVGAMIGQREILSRLA
ELQYTRNDQAFQRSTFRVRGDVIDIYPAESDEVALRVELFDDEIENLSLFDPLTGHSLGK
VPRYTIYPKTHYVTPRERILEAIEQIKVELADRRTYFIKENKLLEEQRIAQRTQFDIEMM
NELGYCSGIENYSRYLSGRKEGEAPPTLFDYMPADGILVIDESHVTVPQIGGMYRGDRAR
KETLVQYGFRLPSALDNRPLRFEEFERLSPQTIYVSATPGAYELEKNPDVVDQVVRPTGL
LDPIIEVRPVATQVDDLLSEIHKRVAVDERVLVTTLTKKMAEDLTDYLDEHGVRVRYLHS
DIDTVERVEIIHDLRMGMFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQT
IGRAARNLNGKAILYGDRITNSMQKAITETERRREKQMKYNEEHGITPQALNKKVGELLD
IGQSDKPKRGKQAVKKAENSATDYKPKSRKELEKELKTLEQQMRDFAKDLEFEKAAAVRD
KLQHLKAYLLEV
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcaaggcaaaccctttatcctccattctcctttcaagccctccggcgaccaa
ccaagtgcgattgccaaattgaccgaaggcttaaatgacggcttggcacatcaaacctta
cttggcgtaaccggctcggggaaaacctttaccattgctaatgtgattgccaagctcaat
cgcccggcgatggtgcttgccccgaataaaacccttgccgcccagctttatgccgagatg
aaagcgttctttccggaaaatgcggtggagtatttcgtctcttactatgattactaccag
cccgaagcctatgtgccggcaagcgatacctttatcgagaaagatgcctctatcaatgag
cagatcgagcaaatgcgactttccgcaaccaaatcctttttggaacgccgagatacgatt
gtagtggcgtccgtttctgccatttacggcttgggtgatgtggacgcttatatgcagatg
atgttgcatttgcaagtgggggcgatgattgggcagcgtgaaattctctctcgccttgcc
gaattgcaatatactcgcaacgatcaggcgttccaacgttcgactttccgagtgcggggc
gatgtgattgatatttaccctgccgaaagcgatgaagtagcgttaagggtagagctgttt
gacgatgaaatcgaaaatctgtcgctgtttgatccgcttacagggcatagcttgggcaag
gtgcctcgctataccatttacccgaaaactcactatgtgacccctcgggaacggattttg
gaggcaatcgagcaaattaaggtcgagcttgccgaccgtcgcacctatttcatcaaagag
aataaattgctggaagagcagcggatcgcccaacgtacgcagtttgatattgagatgatg
aacgagctgggctactgttcgggcattgaaaactactcacgctatctctcgggcagaaaa
gagggcgaagcccctccgaccctgtttgattatatgccggcggacggtattttggtgatt
gatgaaagccacgttactgtgccacaaattggcggaatgtatcgaggcgaccgagcgaga
aaagaaacattggtgcaatacggtttccgtctgccgtctgcactggataaccgcccgttg
agatttgaagagtttgaacgtctttcaccacagacgatttacgtttctgccacaccgggg
gcgtatgaattggagaaaaatcccgatgtggtggatcaagtagttcgtccaaccggcttg
ctcgatccgattatcgaagttcgccccgttgctacgcaggtggacgatttactgtctgaa
attcacaaacgagtggcggtggacgaacgggtgctggtgacaacactcaccaaaaaaatg
gcggaagatctcaccgattatttggacgaacatggcgtacgagttcgttatctacatagc
gacattgacacggtggaacgggtcgaaattatccacgatttacgaatgggaatgtttgat
gtgctggtggggatcaacttattgcgtgagggcttagatatgcccgaagtgtcgctggtt
gccattcttgatgcggataaagagggatttttacgttccgaacgctcgttaattcagacc
atcggacgtgccgcccgaaacctcaacggaaaagcgattttatacggcgaccgcattacc
aactcaatgcaaaaagcaattactgagaccgaacgccgccgtgaaaagcagatgaaatac
aacgaagaacacggcatcacgccacaagcgttgaacaaaaaagtgggtgaattgctcgac
atcggacaatccgacaagccaaaacggggcaaacaagcggtcaaaaaagccgaaaattct
gcaaccgactacaagccgaaatcccgtaaagaactggaaaaagagcttaaaacgctggaa
caacaaatgcgtgattttgcgaaagatctggaatttgaaaaagcggctgcggtaagggat
aagttgcagcatttaaaggcgtatttgttggaggtttaa
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