Mannheimia haemolytica USDA-ARS-USMARC-185: D648_15360
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Entry
D648_15360 CDS
T02522
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase accessory protein YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
mht
Mannheimia haemolytica USDA-ARS-USMARC-185
Brite
KEGG Orthology (KO) [BR:
mht00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mht03009
]
D648_15360
Ribosome biogenesis [BR:
mht03009
]
Prokaryotic type
ribosomal protein modification factors
D648_15360
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
AGI35540
LinkDB
All DBs
Position
complement(1003849..1005612)
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AA seq
587 aa
AA seq
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MSEQTFITGKDAALEDSIATFQHKLKTLGFNIEEASWLNPVPNVWSVHIRDADCPQCFSN
GKGASKKAALASALGEYFERLSTNYFWADFYLGQEIANSEFVHYPTEKWFPIDDEAIPPM
EMMDEFLWEYFDPNGEITPELLVDLQSGNYDRGIVTLPYVRQSDNETVYIPQSIIGNLFV
SNGMSAGNTKNEARVQGLSEVFERFVKNRIITEAISLPEIPQSVIDGYPTIKASIEKLEQ
EDFPILCYDASLGGEFPVICVILLNPNNGTCFASFGAHPNFQVAFERTVTELLQGRSLKD
LDVFAPPSFNNEDVADHANLETHFIDSSGLISWDLFKRDADYPFVHWDFSGTTEQEFNNM
MAIFNKHNQPVYIMDYEHLGVYACRILAPGMSNIYPSDDLVYANNNMGMDWREILLDLPH
FHHDAETYQELLDELDEQSIDDLTRVREFIGVVAEKGSAMQTLRIGELKSMLHLALGNLE
QASDWANWTANMNASVFSAERNNYYRCLIQSIELFLDEERDSEQYRMVFEKMYGKQAVEA
AWGAIQGGNPFHGLTASDESLENMTAHQKLLNAYRKVQKAKVNPIAR
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaacaaacttttattaccggtaaagatgctgcacttgaagacagcattgcgacc
tttcagcataaattaaaaaccttaggttttaatattgaagaagcctcttggttaaatcct
gttccgaatgtgtggtcggtgcatattcgtgatgcagactgtccgcaatgtttttctaac
ggtaagggagcaagcaaaaaagccgctcttgcctctgcattaggtgagtattttgagcgt
ttatctaccaactatttctgggcggatttttatttaggtcaagagattgctaatagtgaa
tttgtgcattatccaaccgaaaaatggtttccgattgatgatgaagccattccaccaatg
gagatgatggacgagtttttatgggaatattttgatccgaatggtgaaatcacgccggaa
ttattggttgatttacaatcaggaaattatgatcgtggaattgttaccctaccttacgtt
cgccaatctgacaatgaaacggtttacattccgcaaagcattatcggcaacctgtttgtt
tcaaacggtatgtcggcaggcaacacaaaaaatgaagctcgagtgcagggcttatccgaa
gtgttcgagcgttttgtcaaaaaccgtattattactgaggcaatcagcttgccggaaatt
ccgcaaagtgtgattgacggttatccgacaatcaaagcctctatcgagaaactagagcaa
gaagacttcccgattttatgctatgacgcttcattaggcggagaatttccagttatttgt
gtgatcttgttaaacccaaataacggtacttgttttgcctcttttggtgcacacccgaat
ttccaagtggcgtttgaacgtaccgtaaccgagttattacaaggccgtagcttaaaggat
ttagatgtgtttgccccaccttcatttaataatgaagatgtagcagatcatgcgaacctt
gagacacactttattgattcaagcggtctaatttcgtgggatcttttcaaacgtgatgcg
gattatccgttcgtgcattgggacttctccggcacaacggagcaagaatttaataatatg
atggcgattttcaacaagcataatcagcctgtgtatattatggattatgagcatttaggt
gtgtacgcttgccgtattcttgcaccgggtatgtcgaatatctatccaagcgatgatttg
gtctatgccaataacaatatgggtatggattggcgtgaaatcttgttagatttgccacat
ttccatcacgatgctgaaacttaccaagaactgcttgatgaattagatgagcaaagcatt
gatgatttaacccgtgtgcgtgaatttattggcgtggtggcagagaaaggctctgcaatg
caaacattgcgtatcggtgagcttaaatcgatgctgcatttagctttaggtaacttagag
caagcctcagactgggcaaactggacagcgaatatgaatgcaagcgtattctcagcagaa
cgtaacaattattaccgctgcttaatccaatcgattgagttgttcttagatgaagagcgt
gattcggaacaatatcgtatggtgtttgagaaaatgtacggtaaacaagcggttgaagct
gcttggggtgcaatccaaggcggtaacccgttccacggtttaactgcatcggacgaatcg
cttgaaaatatgactgcacatcagaaattactgaacgcttatcgcaaagtgcaaaaagcg
aaagtaaatccgattgcgagataa
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