Mannheimia haemolytica USDA-ARS-USMARC-185: D648_17810
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Entry
D648_17810 CDS
T02522
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mht
Mannheimia haemolytica USDA-ARS-USMARC-185
Pathway
mht03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mht00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D648_17810 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mht03021
]
D648_17810 (rho)
03019 Messenger RNA biogenesis [BR:
mht03019
]
D648_17810 (rho)
Transcription machinery [BR:
mht03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
D648_17810 (rho)
Messenger RNA biogenesis [BR:
mht03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
D648_17810 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
NACHT
AAA_25
AAA_22
AAA
Motif
Other DBs
NCBI-ProteinID:
AGI35785
LinkDB
All DBs
Position
complement(753249..754511)
Genome browser
AA seq
420 aa
AA seq
DB search
MHLTQLKNTPVSKLVEMGENQMGLENLARLRKQDIVFAILKQHAKSGEDIFGQGVLEILP
DGFGFLRSSDSSYLAGPDDIYVSPSQIRRFNLQTGDKIEGKIRPPKEGERYFALLKVDSV
NDDKPEASRSKILFENLTPLHANSRLKMERGNGSKEDLTARILDLAAPIGKGQRALIVAP
PKAGKTVLLQNIAQSITHNHPECELIVLLIDERPEEVTEMQRTVRGEVIASTFDEPATRH
VQVAEMVIEKAKRSVEHKKDVVILLDSITRLARAYNTVTPVSGKILSGGVDANALHRPKR
FFGAARNVEEGGSLTIIATALVDTGSKMDEVIFEEFKGTGNMELHLSRRIAERRIFPAID
FNRSGTRKDDLLMAADELQKTWMLRKVLNPMDEVDAIEWLIDKLMMAKTNEEFFEIMKRS
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcatcttactcaacttaaaaacacccctgtttcaaagcttgtggaaatgggtgaaaat
caaatgggcttagaaaatctggctcgtttacgtaaacaagacatcgtatttgctattctt
aaacaacacgcaaaaagcggtgaagacattttcgggcaaggcgtgcttgaaattctaccg
gacggcttcggtttcctccgctcatcagatagctcatatttagccggccctgatgatatt
tatgtttctccaagccaaatccgccgttttaacttacaaactggcgataaaatagaaggt
aaaattcgcccaccaaaagagggagaacgctattttgccctactgaaagttgattcagtt
aatgatgacaaaccggaagcctctcgcagtaaaattctctttgaaaacttaacccctctg
cacgccaattctcgcttaaaaatggagcgtggcaatggatcaaaagaagatttaaccgct
cgtattttagatttagccgccccaatcggtaaaggtcagcgagcgttaattgttgccccg
ccaaaagctggtaaaaccgtgttactgcaaaatattgcacaaagcatcacccataatcat
cctgaatgtgagcttatcgtattattaattgatgagcgtccggaagaagtaacagagatg
caacgcaccgtacgtggtgaagtaattgcctcaacctttgatgaaccggcaacccgccac
gttcaagttgcggagatggtaatcgagaaagcaaaacgctcggtagagcataaaaaagat
gtggtgattttattagactccatcactcgtttagcccgtgcctacaacaccgttaccccg
gtttccggcaaaatcctttccggtggtgtggacgctaacgccttacatcgtccaaaacgt
ttcttcggtgcagcccgtaatgtggaagaaggtggcagcttaaccattatcgcaaccgca
cttgtggataccggatcaaaaatggacgaagtgattttcgaggagttcaaaggtacgggt
aatatggaattacacctctcacgccgtattgctgaacgccgtatcttcccggctattgac
ttcaaccgctcaggtactcgtaaagatgacctcttaatggcagcagacgaactccaaaaa
acttggatgttacgcaaagtcctcaacccaatggacgaagtagatgctatcgaatggcta
atcgacaaattaatgatggcaaaaactaacgaagagtttttcgagattatgaaacgttcg
tag
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