Mannheimia haemolytica USDA-ARS-USMARC-185: D648_22720
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Entry
D648_22720 CDS
T02522
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
mht
Mannheimia haemolytica USDA-ARS-USMARC-185
Pathway
mht02024
Quorum sensing
mht03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mht00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D648_22720
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
D648_22720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mht03019
]
D648_22720
03036 Chromosome and associated proteins [BR:
mht03036
]
D648_22720
Messenger RNA biogenesis [BR:
mht03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
D648_22720
Chromosome and associated proteins [BR:
mht03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
D648_22720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Gag_p24_C
Motif
Other DBs
NCBI-ProteinID:
AGI36275
LinkDB
All DBs
Position
complement(278969..279241)
Genome browser
AA seq
90 aa
AA seq
DB search
MAKGQSLQDPYLNALRRERIPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPARALSHNNNNQAQHAQPAAEVTEQAE
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaggtcaatctttacaagatccatatttgaatgcacttcgtcgtgagcgtatt
cctgtttcaatttatttagttaacggcattaaattacaaggtcagatcgagtcgttcgac
caatttgtgattttattaaaaaacactgtaagccaaatggtgtataaacacgctatttca
acggttgttcctgcccgtgcgttatcgcataacaataacaaccaagcccaacacgctcag
cctgctgccgaagtaactgaacaagcggaataa
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integrated database retrieval system
