Mannheimia haemolytica USDA-ARS-USMARC-185: D648_3960
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Entry
D648_3960 CDS
T02522
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
mht
Mannheimia haemolytica USDA-ARS-USMARC-185
Brite
KEGG Orthology (KO) [BR:
mht00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mht03009
]
D648_3960
Enzymes [BR:
mht01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
D648_3960
Ribosome biogenesis [BR:
mht03009
]
Prokaryotic type
rRNA helicases
D648_3960
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
WSD
Motif
Other DBs
NCBI-ProteinID:
AGI34401
LinkDB
All DBs
Position
complement(2151758..2153092)
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AA seq
444 aa
AA seq
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MTQLMTFEELDLSPQLLKALAHKGYNRPTAIQQATIPAALEGRDLLGSAPTGTGKTAAFL
LPAIQHLLDYPRRKPGAPRILILTPTRELAMQVAEQAQALAKFTQLSIATITGGVAYQNH
GEVFNKNQDIVVATPGRLMQYIKEENFDCRAVEVLIFDEADRMLQMGFGQDAEKIAAETR
WRKHTWLFSATLEGELLEDFAERLLNDPIKVDAEPSRRERKKIQQWYYHADNVEHKTKLL
ARIISEFSVERAIVFVRRREDVRELSETLRKRGIRSTYLEGEMAQTQRNQAINRLKEGVV
NVLVATDVAARGIDIDDIDFVLNYDLPYSADTYLHRIGRTARAGKKGSAISLVEAHDYKL
LGKIKRYTEEVLKPRIIEGLEPRTKAPKDGELNVTSKKEKARIKKKKEAKKEAAKPKVKV
RHKDTKNIGKRRKPSSESAAVKQA
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgacccaattaatgacgtttgaggagcttgatttaagccctcaattacttaaagcctta
gcacacaaaggctataaccgcccaaccgctattcaacaagccacgattccggctgcgtta
gaaggacgtgatctgctcggttcagcccctaccggtaccggcaaaaccgccgctttttta
ctgccggcaattcagcatttattagattatcctcgccgcaaaccaggggctcctcgcatt
ttaattcttaccccaacccgagagctggcaatgcaggtggcggagcaagcccaagcactg
gctaaatttactcagttgagcattgcgactattaccggtggggtggcgtatcaaaatcac
ggtgaagtctttaataaaaatcaagatattgtggttgctaccccgggtcgtttaatgcaa
tacattaaagaggaaaattttgactgccgagcggtggaagtgctgatttttgatgaagca
gatagaatgttgcaaatgggcttcgggcaagatgcggagaaaattgcggcagaaacccgt
tggcgtaagcatacttggttgttttcagcgaccctcgagggcgagttattagaggatttt
gccgagcgattattaaatgatccgattaaagtcgatgccgaaccaagtcgccgtgagcgt
aaaaaaattcagcaatggtattaccacgccgataatgtagagcataaaaccaaattatta
gctcgtattatcagcgaattttcggtggaaagagcgattgtgtttgtccgccgccgagaa
gatgtgcgagaactcagcgaaaccttgcgtaagcggggaattcgttctacttatctcgaa
ggtgaaatggctcagacccaacgtaaccaagctattaaccgtttaaaagaaggcgtagtg
aatgtgttagtggcaaccgatgtggcggctcgaggcattgatatagacgatattgatttc
gtgctgaactacgatttaccttatagtgcggatacttacttgcaccgtattgggcgtacc
gctcgtgctggcaaaaaaggttcggcaatttcattggtggaagctcacgattataaatta
ctcggcaaaattaaacgttacaccgaagaagtactaaaacctcgcattatcgagggctta
gagcctcgcaccaaagccccgaaagatggcgagctaaatgtgaccagcaagaaagaaaaa
gcacgcattaagaagaaaaaagaggcgaaaaaagaagcggcaaaaccaaaagtaaaagtc
cgccacaaagataccaaaaatatcggtaaacggcgtaaaccaagtagtgaatcggctgcg
gttaaacaggcataa
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