Mannheimia haemolytica USDA-ARS-USMARC-185: D648_6460
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Entry
D648_6460 CDS
T02522
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mht
Mannheimia haemolytica USDA-ARS-USMARC-185
Pathway
mht03030
DNA replication
mht03430
Mismatch repair
mht03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mht00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D648_6460
03430 Mismatch repair
D648_6460
03440 Homologous recombination
D648_6460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mht03032
]
D648_6460
03400 DNA repair and recombination proteins [BR:
mht03400
]
D648_6460
Enzymes [BR:
mht01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D648_6460
DNA replication proteins [BR:
mht03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D648_6460
DNA repair and recombination proteins [BR:
mht03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D648_6460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
ADK_lid
Motif
Other DBs
NCBI-ProteinID:
AGI34650
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All DBs
Position
1886512..1887288
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AA seq
258 aa
AA seq
DB search
MTEEKIIRQVVLDTETTGMNMAGGPPQIGHNIIEIGAVEVINRRLTGRTYHVYIKPPREV
DEEAIAVHGITNEFLQDKPVFAEIAEEFLDFIKGAELIIHNAPFDVAFMDQEFSYLPNPP
AKTAEMCTVTDSLQMARRMYPGKRNNLDALCDRLGIDNSKRVLHGALLDAEILADVFLMM
TGGQISLLGEEETEVVSEVIDIEEEFSAIVLNADEAIILKANDEEEESHLALLKLIEKKS
KGNCLWTKALTDTAEISH
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagaaaaaattatccgccaagtagtgctggatactgaaaccacaggaatgaat
atggcaggtggcccgccacagattgggcataatattattgagatcggtgcggttgaagtc
attaaccgccgtttaaccggcagaacttatcacgtttatatcaagccaccgcgtgaggta
gatgaagaggcgattgcagttcacggcatcaccaatgaatttttgcaagataaacctgtt
tttgctgaaattgccgaggagtttttggatttcatcaaaggtgcggaattaattattcac
aatgcccccttcgatgtggcgtttatggatcaagaattttcttatctgcctaatccaccg
gcaaaaaccgcagaaatgtgtaccgtaaccgatagcctgcaaatggcacgaagaatgtac
cccggcaaacggaataatttagatgcactttgcgacaggctcggcattgataatagcaag
cgtgtactacacggggcgttactggatgcggagatcttagctgatgtattcctaatgatg
accggcggtcagatttcattattaggcgaagaagaaactgaagtggtaagtgaagttatt
gatattgaagaagaattttctgcaattgtgttaaatgccgatgaggcaattattcttaaa
gcaaacgatgaagaggaagagtcgcatttagcacttctgaaactgattgagaaaaaatcc
aaaggaaattgcctatggacaaaagcattaaccgacacagcagaaatatctcactga
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