Mannheimia haemolytica USDA-ARS-USMARC-185: D648_7890
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Entry
D648_7890 CDS
T02522
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
mht
Mannheimia haemolytica USDA-ARS-USMARC-185
Brite
KEGG Orthology (KO) [BR:
mht00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mht03021
]
D648_7890
Transcription machinery [BR:
mht03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
D648_7890
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
DUF8076
Flavi_DEAD
DUF8770
DUF8104
Motif
Other DBs
NCBI-ProteinID:
AGI34793
LinkDB
All DBs
Position
complement(1748276..1751188)
Genome browser
AA seq
970 aa
AA seq
DB search
MFLVGQRWLSESENNLGLGIVTSVDHRTVTINFPAAEEERVYAIAVAPLTRVQFQAGDRI
NSIDGWQLEVSEVVENQGAVIYLGKRVDNGEEAVLPEMLLDHKISFSKPQDRLFSAQIDR
SDRFALRFNALQHQQAQYQSPLRGLRGIRASLIPHQLHIAKEVGQRLAPRVLLADEVGLG
KTIEAGMILQQQLFSGRAERVLVLVPESLQHQWLVEMLRRFNLKFSLFDEERCSDFDKQD
ENGDDVSENPFESEALVITSLNWLETSPQRANQVLAADWDLLIVDEAHHLEWSETESSIG
YQLVERLSQQIPAVLLLTATPEQLGQESHFARLALLDSDRFYDYAEFVQEQAQYKPVADA
VSSLLSDKPLSNDEQNAIAELLSEQDTEPMFRAINSKKSDENDRLQARQELISELIDRHG
TSRVLFRNTRQGVKGFPHREYHQISLEMPKQYQNALKVMGMMGSVSQSDLLYPEYLFQRM
NPNAKWAEFDPRIDWLITFLKNHRDEKVLVICKQADTAIALEQVLREREAIRSAVFHEKM
SIVERDKAAAYFAQQEEGAQVLISSSIGSEGRNFQFAKDLVLFNLPDNPDLLEQSIGRLD
RIGQKNDIQIYVPCFNLSAQQMLAEWYHKGLNAFEETCPMGTAIFRELGEELQQFLQKPE
LSAQFDDFVAKTYKRQQYLKAELEKGQDRLLELNSNGGEAAQQLANDIAKEDNNPQLVNF
ALSLFDVIGVEQEDLGEQSIVISPTGHMLVPDFPGLSEDGTTITFNRELALMREEVEFLT
WDHPMIRNGIDLITSGDIGKSAISLLVNNKLPAGTLLLEALYVVEAQAPKGLNLTRFLPP
TPIRVLVDNKGNNIAPQVSFAGLERQLKPVNKQMANKIAKMARADIEKLIKASEKAVEPQ
VQQVIETAKFEANSKLKAELHRLESLKMVNKNIRADEVEALEQQLNASLAQLETANYRLD
SLRVIVSNKA
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgtttttagtcggtcagcgttggctaagtgaatcggaaaataatttaggtttgggaatc
gtgacttcggtggatcatcgcactgtcactatcaatttcccggcagcggaagaagagcgg
gtctatgcaattgcagttgcacctttaactcgagtgcagtttcaagccggagatagaatt
aacagtatagatggctggcagttagaggtttcagaggttgtggaaaatcaaggtgccgta
atctatttgggcaaaagggtggataacggtgaagaagcggtactgcctgaaatgttgctc
gatcataaaatcagtttcagcaaaccgcaagaccgccttttttcggctcagattgatcgc
tcagatcgctttgcattacgctttaacgctttgcagcaccagcaagcgcaatatcagtcg
ccactgcgtggtttgcgaggcattcgagccagcctgattccacatcaattacatattgca
aaagaagtcgggcaacgccttgctcctcgtgtgctattagccgatgaagtgggactgggt
aaaactattgaagctggtatgattttgcaacaacagctattttcgggcagagcagaacga
gtattggtattagtgccggaaagtttgcaacaccaatggttggtggaaatgcttcgccgt
tttaatctgaaattctcgttattcgatgaagaacgttgtagtgattttgataaacaagat
gaaaatggcgatgatgtaagtgaaaatccatttgagagcgaagcgttagtcattacttca
ctaaactggctggaaacctcaccgcaacgagccaatcaagtgcttgctgccgactgggat
ctattaattgttgatgaagctcaccatttagaatggtcggaaaccgaatcttctatcggc
tatcagttggtagagcgtttatctcaacaaattcctgccgtcttgcttttaacggcaaca
ccggagcaattagggcaagagagccattttgcccgcttggcgttgttagattcggatcgt
ttttatgattatgccgagtttgtacaggagcaagcacagtataaaccggtggcagatgcg
gtgagtagcttattaagcgataaaccgctaagtaatgacgagcagaatgcgattgcggag
ctgttaagcgagcaagataccgagccgatgttccgtgcaattaatagcaaaaaatcggac
gaaaatgaccgcttgcaagcccgtcaagagctgattagtgagctaattgaccgccatgga
accagccgggtgttgtttagaaatacccgtcagggagtgaaaggcttcccacatcgggaa
taccaccaaatcagcctagaaatgccgaaacaataccaaaatgcgttaaaagtgatggga
atgatggggagtgtgagccaaagtgatttgctctatcctgaatatttgttccaacgaatg
aacccgaatgcgaaatgggctgaattcgaccctcggattgattggctcatcactttctta
aaaaatcatcgtgatgaaaaagtgctggtgatctgcaaacaggcggacactgcgattgct
ttggagcaagttttgcgtgagcgtgaggcgattcgttctgccgttttccacgagaaaatg
tcgattgttgaacgtgacaaagctgccgcctattttgctcaacaagaagaaggcgctcag
gtgctgattagttcaagcatcggttcagaagggcgaaatttccaatttgctaaagattta
gtgctgtttaatttgccggataacccggatttattggagcaaagtattgggcgattagat
cgtatcggacagaaaaatgacattcagatttatgtgccttgctttaatttatcggctcaa
cagatgttggcagagtggtatcacaagggcttgaatgcgtttgaagaaacctgcccgatg
ggaacagcgatcttccgtgaattaggtgaagaattgcaacaattcctgcaaaaacctgaa
ctttcagcccaatttgatgattttgttgcgaaaacctataaacgccaacagtatttgaaa
gccgaactggagaaaggacaggacagattattagaactgaattctaatggcggagaagca
gctcaacagctcgctaatgatattgcgaaagaagataataatccgcagttggttaatttt
gccttgagtttgtttgatgtgattggcgttgaacaggaagatttaggcgagcagagcatt
gtgattagcccaaccggacatatgcttgtgcctgatttcccggggctatcggaagatggc
acgaccattacctttaatcgtgaactggcgttaatgcgggaagaggtggaatttctcact
tgggatcacccgatgatccgcaatggtattgatttaatcacctccggcgatattggcaaa
tcagcaatctcattgctggtgaataataaattgcctgccggtacattattacttgaggcg
ctttatgtggtggaagcacaagcaccgaaagggctaaatttaacccgtttcctaccgcca
accccgattcgggttttagtggataacaaaggcaacaatattgctccgcaggtctctttt
gccgggcttgaacgccaattaaaaccggtgaataaacagatggcaaataaaattgccaaa
atggctcgagcggatattgaaaaattaattaaagcgagtgaaaaagcggtagaacctcag
gtccaacaggtgattgaaactgccaaatttgaggcaaatagcaaattaaaagcagaatta
caccgcttggaatcactcaaaatggtgaataaaaatattcgagccgatgaagttgaagcc
ttagaacaacagcttaacgcttcccttgcccaacttgaaacggcaaattatcgcttagat
agcttgcgagtgattgtaagtaataaagcgtaa
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