Methanospirillum hungatei: Mhun_1162
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Entry
Mhun_1162 CDS
T00325
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
mhu
Methanospirillum hungatei
Pathway
mhu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mhu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Mhun_1162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhu03400
]
Mhun_1162
DNA repair and recombination proteins [BR:
mhu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Mhun_1162
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Mhun_1162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Kinesin
AAA_16
SWI2_SNF2
Microtub_bd
DUF87
Motif
Other DBs
NCBI-ProteinID:
ABD40910
UniProt:
Q2FPC5
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Position
1316544..1318472
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AA seq
642 aa
AA seq
DB search
MTEFQLVSNFKPTGSQPDAIRQLVEGFKSGSSFQTLLGVTGSGKTFTMANVIEQLQIPTL
VIAHNKTLAAQLYHEFRDFFPNNRVEYFVSYYDYYQPESYIPKKDQYIEKDAQINPKIEM
MRLSATASLLSRNDVIVIASVSCIYGLGRPDTYKRMGFDLGVGQKISRREIISRLVDNLY
ERNEIEIIPGRFRVKGDIIDLVPSYYNNIIRIELFGDEVERITEINRTTGNPVERLRHVY
VYPASHYVIDESQKEKALLEIEKELNERLPHLGMLESHRLRQRTMYDIEMIRETGSCKGI
ENYSRFFDGRKPGEKPYCLLDYFPERFLIFIDESHQTLPQVRAMFHGDRSRKTPLVEYGF
RLPSAFDNRPLRFFEFEQYLKNVICVSATPGDYELDHSTQVVEQIIRPTGLVDPVVEVRP
IQGQMENIKFEIQRTIERGDRILITTLTKRLAEELTEYLLSHGVKTRYLHSDIDTLERTE
IIRELRLGSFDVLVGINLLREGLDIPEVGFIGILDADKEGFLRDARSLIQIIGRAARNSD
AFVVLYADTVTGSMQKAIDETERRRALQIEYNTSHGITPKTIQKPVRDQEIDLGKKKKVP
KSALPNLIINLESQMRSAAQRLDFEEAIRLRDQLTALRKEME
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgacagaatttcaactggtttcaaattttaaacctaccggttcccaaccggatgccatc
agacagctggtagaaggttttaaatctggatcctcatttcagaccttacttggagtaacc
gggtctgggaagacattcacgatggcaaatgtcatcgaacaactccaaatccctaccctt
gtcatcgctcataataaaacactggcagcccagttgtaccacgaatttcgggattttttt
ccgaataaccgtgtagaatattttgtttcctactatgattattaccagcctgagtcatac
atacccaagaaagaccagtatattgagaaggatgcccagataaatccaaagatagagatg
atgcggctctcagcgactgcatctcttctgagccggaatgatgtgattgttatcgcatca
gtatcctgtatctacggtcttgggcggccagatacctataaacgaatgggttttgatctt
ggtgtaggccagaaaattagcaggcgggagattatcagccgcctcgttgacaatctgtac
gaacgaaatgagatagagatcatcccgggaaggttcagagtaaaaggggacattatcgac
cttgtccccagttattacaataacatcatcaggattgaactctttggagacgaagtagaa
cgaatcaccgaaataaacagaaccaccggaaacccggtcgagcgattgagacatgtctat
gtctatcctgccagtcactatgtcattgatgaatcgcaaaaggagaaggcacttcttgag
atagaaaaggaattgaatgagagacttccccatctggggatgcttgaatcacaccggctc
cgtcagcggaccatgtatgatatcgagatgatccgtgagacaggatcatgcaaaggaatt
gaaaattattctcgtttctttgacgggagaaaacccggagagaaaccatattgtcttttg
gattatttcccggaacggtttttaatattcattgatgagagtcaccagacacttccccag
gtcagggccatgtttcacggtgatcggtcaagaaagactcctcttgtagagtatggattc
aggctcccatctgcatttgataaccggccacttaggtttttcgagtttgaacaatacctg
aagaatgtcatctgtgtatctgcaacgcctggtgattatgaacttgatcattcaacacag
gtagtcgaacagattatcaggccaaccggactggttgatccggttgtagaagtcagacca
attcagggacagatggagaatattaaattcgagatccaaaggactatcgaacgaggagat
cgtatcctgataacaaccctgacaaagcggcttgcagaggaactaaccgaatatctcctg
tcacatggagtaaagacccggtatctccattctgatattgataccctggaacgaacagag
atcatacgagaactcaggctcggcagctttgatgttctggtcggaattaatctacttcgt
gaggggcttgatattccagaagtcggatttatcggaattcttgatgctgacaaggaaggg
tttttacgagatgcgcgtagtctcatccagattatcgggcgtgcggcacgaaactccgat
gcttttgttgtcctgtatgccgatacggttaccggatccatgcaaaaggcaatagatgag
actgagcggagacgggcacttcagattgaatataatacatctcatggaataaccccgaag
accattcaaaagccggttcgtgatcaggagattgatctcggaaagaagaagaaggttcca
aaatcagccctgccaaatctcataatcaatctggagtcgcagatgagatctgcagcccag
agacttgattttgaagaagcaatacgactgagggaccaattaactgctcttagaaaagaa
atggaatag
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