Methanospirillum hungatei: Mhun_1816
Help
Entry
Mhun_1816 CDS
T00325
Name
(GenBank) DEAD/DEAH box helicase-like protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mhu
Methanospirillum hungatei
Pathway
mhu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mhu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mhun_1816
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mhu03019
]
Mhun_1816
03009 Ribosome biogenesis [BR:
mhu03009
]
Mhun_1816
Enzymes [BR:
mhu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Mhun_1816
Messenger RNA biogenesis [BR:
mhu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Mhun_1816
Ribosome biogenesis [BR:
mhu03009
]
Prokaryotic type
rRNA helicases
Mhun_1816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Helicase_RecD
CMS1
Motif
Other DBs
NCBI-ProteinID:
ABD41536
UniProt:
Q2FKY7
LinkDB
All DBs
Position
2051378..2052973
Genome browser
AA seq
531 aa
AA seq
DB search
MEIPSFSDLQLSPGIIKAIRDIGYEEPTPIQQEVIPLILAGNDVAGQAYTGTGKTAAFGI
PAIELCQPANRNVQTIVLCPSRELAVQVGTELNKLAMHKKGISILPVYGGQPIERQIKAL
SRGVQIIIGTPGRVIDHIKRKTLLLDAVSLVVLDEADQMLDMGFREDIEEILSHIPKERQ
TVILSATFPPEILDISRRFQKNPIDVKMVHQELTVPQIEQYYIEVREPAKADTLIRVLEF
YQPQRTIIFCNTQIAVDAVSSALKAEGFLADGLHGGMAQAQRDKVMNAFRKGQLEILIAT
DVAARGIDVEEIDLVCNFDFPQDDEYYVHRIGRTARAGRTGRAISFVSPRERYRLRDVRR
STRAEPEPLPIPTLREIGGKKATTTLADADALMKTGDLTFCRPMIEEKLAEGADPVALAT
SLLMIAAGIATEKEDDLEKYLGEQAVVRLSAGRQDGILVRDILQIVRNSGRNIQNDIGNI
RIGQTATYIDVPEQSVKEVIDVLNGAQIGRIRLVAKRGRKQSEIPKRRFNK
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggaaataccttctttttcagacctccagctttcacctggaatcattaaagccatccgt
gatatcggatatgaagaaccaaccccaatacagcaagaggttatcccattaattctcgcc
ggcaatgatgtagcaggacaggcatacaccggaaccggtaagactgccgcgtttggtatc
cctgcaatcgaactctgtcagcctgcaaaccggaacgttcagactattgtactctgtcca
agcagagaactggcggtgcaggtaggaacagaactcaataaactcgcaatgcataaaaaa
gggatatctatcctgccggtatatggaggccagcctattgaacgacagattaaagccttg
tcgagaggtgtccagataatcattggaacaccggggcgggttattgatcatatcaaaaga
aagacactccttcttgatgcggtctcccttgttgtccttgatgaggcagaccaaatgttg
gacatgggttttcgcgaagatatcgaagagattttgtcccatataccaaaagaacgacag
accgttatcctctctgcaaccttccctcctgaaatccttgatatctcccgacgtttccag
aaaaaccccatcgatgtcaagatggtgcaccaggaactgacggtcccgcagattgaacaa
tactatatcgaagtcagagaaccggcaaaagcagatacgctcatcagagttcttgaattt
taccaaccccagcggaccatcatcttttgtaatacccagatcgccgttgacgccgtatcc
agcgccctcaaggcagaagggttcctcgccgacggactgcatggcggtatggcacaggcc
cagcgtgacaaagtcatgaatgcattcagaaaggggcaacttgagattctgatcgctacc
gatgttgctgcccgtgggattgatgttgaagagatagaccttgtctgtaactttgacttc
ccccaggatgatgagtactatgtacaccggatagggagaacggcacgggcaggacgtacc
ggtcgtgccatcagctttgtcagcccccgtgagcggtacagacttcgggatgtcagacgg
agtacccgtgcagagcctgagccactccctattccgacccttcgtgagataggcgggaag
aaggcaacgactacccttgccgatgccgatgccctgatgaagaccggagacctcacattc
tgccggccgatgatagaagagaaacttgccgaaggagccgaccccgtggcacttgcaacc
tctcttctgatgattgcagcaggcattgcaaccgaaaaagaggatgatcttgagaagtac
ctgggagaacaggcagtcgtcagactttctgcaggaaggcaggacggcattctggtcagg
gatattctgcagattgtaagaaacagtggcagaaacatccagaatgacattggaaatatc
aggattggtcagactgccacctatattgatgtccccgaacaatcggtgaaggaagtcatt
gatgtcctgaacggtgcacagatagggagaatcagacttgtggcaaaaagagggagaaag
caatctgaaatcccgaagagacgctttaataaatga
DBGET
integrated database retrieval system
