Methanospirillum hungatei: Mhun_3181
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Entry
Mhun_3181 CDS
T00325
Name
(GenBank) protein of unknown function UPF0027
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
mhu
Methanospirillum hungatei
Brite
KEGG Orthology (KO) [BR:
mhu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mhu03016
]
Mhun_3181
Enzymes [BR:
mhu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
Mhun_3181
Transfer RNA biogenesis [BR:
mhu03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
Mhun_3181
Prokaryotic type
tRNA splicing ligases
Mhun_3181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
ABD42863
UniProt:
Q2FUK7
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All DBs
Position
3473766..3475199
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AA seq
477 aa
AA seq
DB search
MIEGVVRKGEYEWELPVGFIPGMHVPGRFFLSDELTKTLEEGALQQLAHVATMPGIIHNS
LAMPDIHWGYGFPIGGVAAFEYETGVISPGGVGFDINCGVRLLTTPLKPSDLAQKKEILD
NLFDAVPVGVGARSSLRLSEKQLEKMMTDGARFAVAEGYGNSDDITHCEEQGRMKEADPA
HVSRKARSRGVPQSGTLGAGNHFLEIQVVEEIYDEEAARTFGVEQGQVCMMVHCGSRGLG
HQVCTDHLQVLEHAVSKYHIQLPDKQLACAPLTSPEGKAYFGGMAAAANYAWANRQIITH
QIRSVLTRMSGIGYDDIRLVYDVAHNVAKIEEHEIDGKTRKVCVHRKGATRAFGPKCPDV
PADYTHVGQPVIIPGSMGSSSYLLKGTDVAMNRTFGSTCHGAGRVLSRSQAKKKIQGKNI
RETLGRAGIMVKAPHDGAIAEEAPDAYKSSSEVVSVVHNLGLSRLVARLEPLGVIKG
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaggtgttgtaagaaagggagaatatgaatgggagttgccggtcgggtttatc
cctgggatgcatgttccgggccggttttttctatctgatgaactgacaaagacactggag
gaaggtgcccttcagcagcttgcacatgtcgcaaccatgccgggaataattcataactcc
cttgccatgccggatatccactggggatacggctttcccatcgggggtgtggctgcattt
gaatatgagaccggcgtcatctcccccggcggggtggggtttgatatcaactgcggggtc
agacttctcacaacacccctgaaaccatcagaccttgctcaaaagaaagagatcctggac
aatctgttcgacgcagtccccgtcggagtgggtgcacgctcttcccttcgtctctcagaa
aagcagcttgagaagatgatgactgatggtgcccgctttgcagttgcagaggggtatgga
aattctgatgatatcacccactgtgaagaacagggacggatgaaagaagctgaccctgcc
catgtctcgcgaaaagccaggtcacgaggggttccccagagcgggacactgggcgcgggg
aatcactttcttgagatacaggtcgtcgaggagatctatgatgaagaggccgcacggacc
tttggagttgaacagggccaggtctgcatgatggtacattgtggatcccgtggccttggt
caccaggtctgtactgatcatcttcaggtgcttgagcatgcagtctcaaaatatcacatc
cagctccctgacaagcagcttgcctgtgcccccctcacatcaccggagggaaaagcatac
tttggcgggatggctgcagcagcgaattatgcctgggccaaccggcagatcatcacccat
cagattcggtcagtcctcaccagaatgtccggaatcggctatgatgacatccggcttgtc
tatgatgttgctcacaacgttgcaaagattgaagagcatgagatagatggaaagacaagg
aaggtctgtgtccaccggaaaggtgcaacccgtgcctttggtccaaaatgtccggatgtt
cctgcagattacacacatgtcggccaaccggtaataatcccgggaagcatgggctcatcc
tcgtatttactcaaagggaccgatgttgccatgaaccggacctttggctctacctgccat
ggcgcaggtcgggtgctctcccgatcccaggccaagaagaagatccaggggaaaaatatc
agggaaactctcggaagagcgggaatcatggttaaggcaccccatgacggggcgattgca
gaagaggcgccggatgcatacaaatcatcatctgaagtggtatcggtggtccataacctc
gggctgtcaagacttgtggcgcggcttgaaccactcggcgtaatcaagggataa
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