Mesorhizobium huakuii: MCHK_2073
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Entry
MCHK_2073 CDS
T06432
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mhua
Mesorhizobium huakuii
Pathway
mhua03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mhua00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MCHK_2073 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhua03021
]
MCHK_2073 (rpoB)
03400 DNA repair and recombination proteins [BR:
mhua03400
]
MCHK_2073 (rpoB)
Enzymes [BR:
mhua01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MCHK_2073 (rpoB)
Transcription machinery [BR:
mhua03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MCHK_2073 (rpoB)
DNA repair and recombination proteins [BR:
mhua03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MCHK_2073 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AID29887
LinkDB
All DBs
Position
complement(4353027..4357163)
Genome browser
AA seq
1378 aa
AA seq
DB search
MAQTQTFNGRRRVRKFFGKIPEVAEMPNLIEVQKASYDQFLMVDEPKGGRPDEGLQAVFK
SVFPISDFSGSSMLEFVKYEFEGPKFDVDECRQRDLTYAAPLKVTLRLIVFDIDEDTGAK
SIKDIKEQDVYMGDMPLMTLNGTFIVNGTERVIVSQMHRSPGVFFDHDKGKSHSSGKLLF
AARVIPYRGSWLDIEFDSKDVVHARIDRRRKIPVTSLLMALGMDGEEILSTFYNKITYVR
AGDHWRIPFNVERFRGLKAVGDLVDADTGEIVVEAGKKITARQARQLGEKGLKAIKATDE
DLLGNYLAEDIVNYATGEIFLEAGDEIDEKTLKVLLGTGEQEIKVLDIDHVNVGAYIRNT
LNVDKNESRQDALFDIYRVMRPGEPPTLETAEAMFNSLFFDSERYDLSAVGRVKMNMRLE
LKAEDTVRVLRKEDILAVVKTLVELRDGKGEIDDIDNLGNRRVRSVGELMENQYRVGLLR
MERAIKERMSSIEIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEITHKRRL
SALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGFIESP
YRKIVDGKLTNDVVYLSAMEEAKHHVAQANAELDKNGGFVDEFVICRSAGEVMMAPRENV
DLMDVSPKQMVSVAAALIPFLENDDANRALMGSNMQRQAVPLVRAEAPFVGTGMEPIVAR
DSGAAIGARRGGIVDQVDATRIVIRATEDLDPGKSGVDIYRLMKFQRSNQNTCINQRPLV
RMGDRVNKGDIIADGPSTELGDLALGRNVLVAFMPWNGYNYEDSILLSERIVADDVFTSI
HIEEFEVMARDTKLGPEEITRDIPNVSEEALKNLDEAGIVYIGAEVQPGDILVGKITPKG
ESPMTPEEKLLRAIFGEKASDVRDTSMRMPPGTFGTVVEVRVFNRHGVEKDERAMAIERE
EIERLAKDRDDEQAILDRNVYARLSDVLVGKEAIAGPKGFKKGSTLSKDTLDEYPRSQWW
QFAVENEKLQSELEALRGQYDDSKKALEQRFMDKVEKVQRGDEMPPGVMKMVKVFVAVKR
KMQPGDKMAGRHGNKGVVSRIVPVEDMPFLEDGTHADIVLNPLGVPSRMNVGQILETHLG
WACAGMGKKIGELIDTYKAAGDIKPLRKTLESFMPANDRNEPIREYDDESIVRLSEQMRR
GVSIATPVFDGAHEADINIMLEQAGLHTSGQSQLYDGRTGEPFDRKVTMGYIYMLKLHHL
VDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDV
AGRTKVYEAIVRGDDTFEAGIPESFNVLVKEMRSLGLNVELENTKLDDAPVRLPDAAE
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atggcccagacccagactttcaatggccgcagacgcgtacgcaagttcttcggaaagatt
ccggaagttgcggagatgccgaacctgatcgaggttcagaaggcatcctatgaccagttc
ctgatggtggacgagcccaagggcggccgtccggacgagggactgcaggctgttttcaag
tcggtcttcccgatctccgatttttccggctcctcgatgctggagttcgtgaagtacgag
ttcgaaggaccgaaattcgacgttgacgagtgccgtcagcgcgacctgacctatgccgcg
ccgctgaaggtgacgctgcgcctcatcgtgttcgatatcgacgaggataccggcgccaag
tcgatcaaggacatcaaggagcaggacgtctacatgggcgacatgccgctcatgaccttg
aacggcaccttcatcgtcaacggtaccgagcgcgtcatcgtctcgcagatgcaccgttcg
ccgggcgttttcttcgaccacgacaagggcaagtctcactcgtcgggcaagcttctgttt
gccgcgcgtgtcattccctatcgcggctcgtggctcgacatcgagttcgattccaaggac
gtcgtgcacgcccgcatcgaccgccgccgcaagattccggtgacgtcgctgttgatggcg
ctcggcatggatggcgaagagatcctgtcgaccttctacaacaagatcacctatgtgcgc
gccggcgaccactggcgtattccgttcaacgtcgagcgtttccgcggcctcaaggccgtc
ggcgacctggtcgatgccgatacgggcgagatcgttgtcgaggccggcaagaagatcacc
gcccgtcaggcgcgccagctcggtgagaagggcctgaaggcgatcaaggcgaccgacgag
gatctgctcggcaactacctggccgaggacatcgtcaattacgctaccggtgagatcttc
ctcgaagccggcgacgagatcgacgagaagaccctgaaggtgctgcttggcaccggcgag
caggagatcaaggttctcgacatcgaccacgtcaatgtcggcgcctacatcagaaacacg
ctcaacgtcgacaagaacgagagccgccaggacgcgctgttcgacatctatcgtgtcatg
cgccccggcgagccgccgacgctcgagaccgccgaagccatgttcaactcgctgttcttc
gactcagagcgctatgacctgtcggctgtcggccgcgtcaagatgaacatgcgcctcgag
ctcaaggccgaggacaccgtgcgcgtgctgcgcaaggaagacatcctggccgtggtcaag
acgctggtcgaactgcgcgacggcaagggcgagatcgacgacatcgacaatctcggcaac
cgccgcgtgcgttccgtcggcgagttgatggagaaccagtaccgcgtcggcctgctgcgc
atggagcgcgcgatcaaggagcgtatgtcctcgatcgagatcgacacggtgatgccgcag
gacctgatcaacgccaagccggcggccgccgccgtgcgcgagttcttcggttcctcgcag
ctgtcgcagttcatggaccagaccaacccgctgtcggagatcacccacaagcgccgcctg
tcggcgcttggaccaggcggtctgacccgcgagcgcgccggcttcgaagtgcgcgacgtg
cacccgacgcattacggccgtatctgcccgatcgagacgccggaaggcccgaatatcggt
ctgatcaactcgctggccaccttcgcgcgcgtcaacaagtacggcttcatcgagagcccg
taccgcaagatcgtcgatggcaagctgaccaatgacgtcgtctatctctcggcgatggaa
gaagccaagcaccatgtcgcgcaggccaacgccgagctcgacaagaatggcggcttcgtc
gacgagttcgtcatttgccgcagtgccggcgaagtgatgatggcgccgcgcgagaatgtc
gacctgatggacgtgtcgcccaagcagatggtgtcggtggccgcggccctgatcccgttc
ctggaaaacgacgacgccaaccgtgcgctgatgggctcgaacatgcagcgtcaggccgtg
ccgctggtgcgcgccgaggcgccgtttgtcggcaccggcatggagccgatcgttgcccgt
gactccggcgccgccatcggcgcccgccgcggcggcatcgtcgaccaggtggacgcgacg
cgtatcgttatccgcgcgacggaagatctcgatccgggcaagtccggcgtcgacatctac
cggctgatgaagttccagcgttcgaaccagaacacctgcatcaaccagcgtccgctggtg
cgcatgggtgaccgggtcaacaagggcgacatcatcgccgacggcccgtcgaccgagctc
ggcgatctggcgctcggccgcaacgtgctggtcgcgttcatgccgtggaacggctacaac
tacgaggactcgatcctgctctccgagcgcatcgtggccgacgacgtcttcacctcgatc
cacatcgaggagttcgaggtcatggcgcgcgataccaagctcggtccggaggaaatcacg
cgcgacattccgaacgtttcggaagaagcgctgaagaacctcgacgaagccggcatcgtc
tatatcggtgcggaagtgcagccgggcgacatcctggtcggcaagatcacgccgaagggc
gaaagcccgatgacgccggaagagaagcttctgcgcgccatcttcggcgaaaaggcttcc
gacgtgcgcgacacctcgatgcgcatgcctccgggcactttcggcaccgtcgtcgaggtg
cgcgtgttcaatcgccacggtgtggagaaggacgagcgcgccatggcgatcgagcgcgag
gagatcgaacgcctcgccaaggaccgcgacgacgagcaggccatcctggaccgcaacgtc
tacgcgcgtctttccgacgtgctcgtcggcaaggaagcgatcgccggaccgaagggcttc
aagaagggctcgacgctgtccaaggatacgctcgacgagtatccgcgttcgcaatggtgg
cagttcgccgtggagaacgaaaagctccagagcgaactggaagccctgcgtggccagtac
gacgactccaagaaggcgctcgagcagcgcttcatggacaaggtcgagaaggtgcagcgc
ggcgacgaaatgcctccgggcgtcatgaagatggtcaaggtcttcgtggcggtgaagcgc
aagatgcagccgggcgacaagatggccggccgtcacggcaacaagggtgtcgtgtcacgc
atcgttccggtcgaggacatgcctttcctcgaggacggcacgcatgccgatatcgtgctc
aacccgctgggtgtgccgagccgcatgaatgtcggccagatcctggaaacgcatctgggc
tgggcctgcgcgggcatgggcaagaagatcggcgagctgatcgacacgtacaaggccgcc
ggcgacatcaagccgctgcgcaagacgctcgagagcttcatgccggccaatgaccgtaac
gagccgatccgcgagtatgacgacgagagcattgttcgcctcagcgaacagatgcgccgc
ggcgtctcgatcgcgaccccggtgttcgacggtgcccacgaggctgacatcaacatcatg
ctggagcaggcgggcctgcacaccagcggtcagtcgcagctctatgacggacgcacgggc
gagccgttcgatcgcaaggtgacgatgggctatatctacatgctcaagcttcaccacctc
gtggacgacaagatccacgcgcgttcgatcggtccgtactcgctcgtcacccagcagccg
ctgggcggcaaggcgcagttcggtggccagcgcttcggcgaaatggaggtctgggcgctg
gaagcctacggcgccgcctacacgctgcaggaaatgctgacggtgaagtcggacgacgtt
gccggccgcaccaaggtctacgaggcgatcgtgcgcggcgacgacacgttcgaggccggc
attccggagagcttcaacgtgctcgtcaaggaaatgcggtctctcggcctcaatgtcgag
ctggagaacaccaagctcgacgacgccccggttcggctgcccgacgcggctgagtaa
DBGET
integrated database retrieval system
