Mesorhizobium huakuii: MCHK_2107
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Entry
MCHK_2107 CDS
T06432
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mhua
Mesorhizobium huakuii
Pathway
mhua03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mhua00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MCHK_2107
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhua03021
]
MCHK_2107
03400 DNA repair and recombination proteins [BR:
mhua03400
]
MCHK_2107
Enzymes [BR:
mhua01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MCHK_2107
Transcription machinery [BR:
mhua03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MCHK_2107
DNA repair and recombination proteins [BR:
mhua03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MCHK_2107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
IDH
Motif
Other DBs
NCBI-ProteinID:
AID29921
LinkDB
All DBs
Position
complement(4327665..4328675)
Genome browser
AA seq
336 aa
AA seq
DB search
MIQKNWQELIKPNKIEFSSKKKTLTTLVAEPLERGFGLTLGNALRRVLLSSLRGAAVTAV
QIDGVLHEFSSIAGVREDVTDIVLNIKEIAIRMEGDGPKRMVVRKQGPGAVLAGDIQTVG
DVEILNPDHVICTLDEGAEIRMEFTVDTGKGYVPAERNRAEDAPIGLIPVDSLYSPVKKV
SYKVENTREGQVLDYDKLTMTIETDGSISGEDAVAFAARILQDQLGLFVNFDEPQKEVAA
EAVTELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLN
EIKEVLAAMGLHLGMEVPDWPPENIEDLAKRYEDQY
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgatccagaaaaattggcaggaactgatcaagccgaacaagatcgagttctcgtcgaag
aagaagacgctgaccacgctggtcgccgagccgcttgagcgtggctttggcctcacgctg
ggcaacgcgctgcgccgcgtgcttctgtcttcgctgcgcggtgcggctgtgaccgccgtg
cagatcgacggcgttctgcatgaattctcgtccatcgccggtgtgcgcgaggacgtgacc
gacatcgtcttgaacatcaaggaaatcgccatccgcatggaaggcgacggccccaagcgc
atggttgtgcgcaagcagggaccgggtgcggttctcgccggcgacatccagacggttggc
gatgtcgagatcctcaatcccgaccacgtcatctgcacgctggacgaaggcgctgaaatc
cgcatggaatttaccgtcgacaccggcaagggctacgtgccggcagagcgcaaccgcgcc
gaggacgcgccgatcggcctgatcccggtcgacagcctctattcgccggtcaagaaggtc
tcctacaaggtcgagaacacccgcgagggccaggttctcgactatgacaagctgaccatg
accatcgagaccgacggttcgatctcgggcgaggacgcggtggctttcgccgcccgcatc
ctgcaggaccagcttggcctgttcgtcaacttcgacgagccgcagaaggaagtcgccgcc
gaagccgtcaccgagctcgccttcaacccggcgctgctcaagaaggtcgacgagctcgag
ctttcggtgcgttcggccaactgcctgaagaacgacaacatcgtctacatcggcgatctc
atccagaagaccgaagccgagatgctgcgcaccccgaacttcggccgcaagtcgctgaac
gagatcaaggaagtgctggcggcaatgggcctgcacctcggcatggaagtgccggactgg
ccgccggaaaacatcgaagacctcgccaagcgttacgaagaccaatattga
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