Mesorhizobium huakuii: MCHK_2519
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Entry
MCHK_2519 CDS
T06432
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mhua
Mesorhizobium huakuii
Brite
KEGG Orthology (KO) [BR:
mhua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mhua03032
]
MCHK_2519 (topA)
03400 DNA repair and recombination proteins [BR:
mhua03400
]
MCHK_2519 (topA)
Enzymes [BR:
mhua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MCHK_2519 (topA)
DNA replication proteins [BR:
mhua03032
]
Prokaryotic type
DNA Topoisomerases
MCHK_2519 (topA)
DNA repair and recombination proteins [BR:
mhua03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MCHK_2519 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AID30330
LinkDB
All DBs
Position
complement(3923390..3926011)
Genome browser
AA seq
873 aa
AA seq
DB search
MDVVVVESPAKAKTINKYLGKNYKVLASFGHVRDLPAKDGSVRPDEDFAMSWAVDTASGK
RLADIAKAVKDADGLILATDPDREGEAISWHVLEVLKQKRALKDKPVSRVVFNAITKSSV
LEAMANPRQIDAPLVDAYLARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRLVCDR
ESEIERFIREEYWQIAAILGTPRNETFEARLTAFERKKLQKLDIANKAQADDIKAMLEGA
TFKALSVEAKPTKRNPGPPFTTSTLQQAASSGLGFSATRTMQVAQRLYEGMEIGGETTGL
ITYMRTDGVQMAPEAIDAARDAIAKEFGPKYLPEKPRFYTTKAKNAQEAHEAIRPTDFMR
TPASVRQYLDSDQMRLYELIWKRAIASQMQPAEIERTTVEIEAVNGARTAELRAVGSVVR
FDGFIAAYTDQKDDDAEDEENRRLPEIRAGEQLARQAINATQHTTEPPPRYSEATLIKKL
EELGIGRPSTYTAILKTLEDRDYVTIDKRRLVPQAKGRLLSAFLESFFERYVEYDFTASL
EEKLDEISDGKLAWKDVLRDFWKDFSGAVADIKELRVTDVLDALNEELAPLVFPAREDGS
NPRICPKCGTGNLSLKLGKFGAFVGCSNYPECSFTRQLGDAANPNGENGGGDDGTKVLGK
DPYTAEEITLRSGRFGPYLQRGDGKDAKRSSLPKGWTPETIDHEKALALLALPRDIGKHP
ETSKMISAGLGRYGPFVLHDGTYANLDSIEDVFSIGLNRAVTVIAEKQSKVKGGRNGGTP
AALKELGDHPDGGGKIVVRDGKYGPYVNFGKVNATLPKGKDPQSVTIEDALALIAEKEAK
GGGGKKPFRKAAAAKAPAAKKTAAKKPAAKKKG
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcgtcgtcgtcgaatcgccggccaaggcgaagactatcaacaaatacctcggc
aagaactataaggttctggcctcgttcggccatgtccgcgatttgccggccaaggacggc
tcggtgcgcccggatgaagacttcgccatgtcctgggcggtcgacaccgcctcgggcaag
cggctcgccgacatcgccaaggcggtcaaggatgccgacggcctgatcctcgccaccgac
ccggatcgcgaaggcgaggccatttcctggcatgtgctggaagtgttgaagcagaagcgt
gcgctgaaggacaagccggtcagccgcgtcgtcttcaacgccatcaccaaatcgtcggtg
ctggaggccatggccaatccgcgccagatcgacgcgccgctggtcgatgcctatcttgcc
cgccgggcgctggactatctcgtcggcttcacgctgtcgccggtgctgtggcgcaaactg
cccggcgcccgctcggccggccgcgtccagtccgtggccttgcgcctggtctgcgaccgt
gaatccgagatcgaacgcttcatccgcgaggaatattggcagatcgccgccatcctcggc
acgccgcgaaacgagactttcgaagcgcggctgaccgccttcgagcgcaagaagctgcaa
aagctcgacattgccaacaaagcgcaggccgacgacatcaaggcgatgctcgagggcgcg
accttcaaggcgttgtcggtggaagccaagccgaccaagcgcaaccctggcccgcccttc
accacatcgacgctgcagcaggccgcttcatcgggcctcggtttctccgccacccgcacc
atgcaggtggcgcaacggctctatgaaggcatggagatcggcggcgaaacgaccggcctg
atcacctatatgcgaaccgacggcgtccagatggcgcccgaggcgatcgacgctgcccgc
gacgccattgccaaggaattcggcccgaaatatctgccggaaaagccgcgtttctacacg
accaaggccaagaatgcccaggaagcgcacgaggcaatccgtccgacggatttcatgcgc
accccggcatcggttcggcaatatctcgattccgaccagatgcggctctatgagctgatc
tggaagcgcgccatcgccagccagatgcagccggccgagatcgagcgcacgacagtcgag
atcgaggcggtcaacggtgcacgcaccgccgagcttcgcgctgtcggttcggtcgttcgc
ttcgacggcttcatcgccgcctacaccgatcagaaggacgacgacgcggaggacgaggaa
aaccgccgtctgccggaaatccgcgccggcgagcagcttgcccgccaggcgatcaacgcc
acccagcacacgaccgagccgccgccgcgctattccgaggccacgctgatcaagaagctg
gaagaactcggcatcggccggccttcgacctatacggcaatcctgaagacgctcgaggac
cgcgactatgtcacgatcgacaagcgccggctggtgccgcaggccaagggccgcctgttg
tccgctttcctcgaaagcttcttcgagcgctacgttgaatatgacttcacggcatcgctg
gaggaaaagctcgacgagatttccgacggcaagctcgcctggaaggacgtgctgcgcgat
ttctggaaggatttttccggcgccgtcgccgacatcaaggaactgcgcgtcaccgacgtg
ctcgatgcactgaacgaggaactggcgccgctggtgttccccgcgcgcgaagacggctcg
aacccgcgcatctgcccgaaatgcggcaccggcaacctctcgctgaagctcggcaagttc
ggcgccttcgtcggctgctcgaactatcccgaatgctccttcacccgccagctcggcgac
gccgccaatccgaatggcgagaatggcggcggggatgacggcaccaaggtgctcggcaag
gatccctacacggccgaggaaatcaccctgcgctcgggtcgcttcggcccctacctccag
cgcggcgacggtaaggacgccaagcgctcgagcctgcccaagggttggacgcccgagacc
atcgaccatgagaaagcattggcgttgctggcgctgccgcgcgatatcggcaagcatcct
gaaacgtccaagatgatctcggccgggctcggccgctacggcccgttcgtgctgcatgat
ggcacctatgccaatctcgacagcatcgaggatgtgttctcgatcggcctcaaccgcgcc
gtcacggtgattgccgagaagcagtcgaaggtcaagggcggccgtaatggcggcacgccg
gcggccctgaaggagcttggcgaccatccggacggtggcggcaagatcgtcgtgcgcgac
ggcaaatacgggccttacgtcaatttcggcaaggtcaacgccacgctgcccaagggcaag
gatccgcaatcggtgaccatcgaggatgcgttggcgctgattgccgagaaggaagccaag
ggcggcggcggcaagaagccgttccgcaaggcggcagccgccaaggcgcccgcagccaag
aaaacagccgccaagaagccggcggcgaagaaaaaagggtag
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