Mesorhizobium huakuii: MCHK_2545
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Entry
MCHK_2545 CDS
T06432
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mhua
Mesorhizobium huakuii
Pathway
mhua03030
DNA replication
mhua03430
Mismatch repair
mhua03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mhua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MCHK_2545 (dnaE)
03430 Mismatch repair
MCHK_2545 (dnaE)
03440 Homologous recombination
MCHK_2545 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mhua03032
]
MCHK_2545 (dnaE)
03400 DNA repair and recombination proteins [BR:
mhua03400
]
MCHK_2545 (dnaE)
Enzymes [BR:
mhua01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MCHK_2545 (dnaE)
DNA replication proteins [BR:
mhua03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MCHK_2545 (dnaE)
DNA repair and recombination proteins [BR:
mhua03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MCHK_2545 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
AID30356
LinkDB
All DBs
Position
3895987..3899514
Genome browser
AA seq
1175 aa
AA seq
DB search
MADDRLPRDPLKREAAIAAARPEVPARPFVHLRVHSAYSLLEGALQLGKIVGHAVKDEAP
AIAVTDTNNLFGALEFAQKAVKEGIQPIIGCQIALAFSGENSDGQRDRRRQGPEMRPVVL
LAATEAGYSNLVRLVSRVYLETPPGEAVHLTTEMLEGKADGLICLSGGPRGPIGNALKED
RRDLAEVRLLTLKAMFGDRLYVELDRVAGYDRVIEHQTIDLAYAHELPLVATNEAFFSSR
DDYEAHDALIAIAEGSVVAVDTRRRLSPDNFLRSQADMAKLFADLPEAIDNTVEIAQRCS
YYPKTRSPILPRFTGGDASDKDAAEKAEAAELARQAREGLDARLALHGPTPGYTVEQYRE
RLEFELGIIEKMKFPGYFLIVADFIKWAKAQGIPVGPGRGSGAGSLVAYSTTITDIDPLR
FSLLFERFLNPDRVSMPDFDIDFCQDRREEVIRYVQQKYGRDQVGQIITFGTLQARAVLR
DVGRVLQMPYGQVDKLSKMVPQNPANPVKLADAIANEPRFAEEAEKEPIVQTLLDMAQKL
EGLYRHASTHAAGIVIGDRPLSELVPMYRDPRSDMPVTQFNMKYVEQAGLVKFDFLGLKT
LTVLETAVKLIRRRGIDIDLATIPLDDPETYAMLSRGEVVGVFQVESAGMRKALIGMRPD
CIEDIIALVALYRPGPMENIPTYNARKHGEEEMASIHPKIDHLVKETQGVIVYQEQVMQI
AQELSGYSLGEADLLRRAMGKKIRAEMDKQRERFVSGAVERGVSKTQADFIFDLLAKFAD
YGFNKSHAAAYAVVSYQTAYLKAHYPVEFLAASMTLDMGNTDKLADFRQDALRLGIEVLA
PSVMTSFRPFEVGENRIYYSMAALKGVGDAAVEHIVAVRGEKPFKNLADFCERVDPKIVG
KRVFESLIMAGALDCFGHDRAQMMAGVERMMGLASLAQQNAVSGQADIFGASLGAQSQAL
NLPATDPWLAADRLHREFQVVGFYLSAHPLDEYKAALQKMRVQNWAEFSAAVKRGASAGR
LAGTVTSKQERKTRTGNKMGVVAFSDTSGQYEAVLFSEALAQYRDLLEAGRSVVITVAAE
DRPEGVNLRINSVQSLEEEASRIQKALRIFVRNDGPASIIQSQLTQRGESQVSIIVIKEE
AQGEVEIALQGGYRVSPQIASAMRAVPGVVEVELV
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgacagactcccacgcgaccccctgaagcgcgaagccgcgatagcggcggcg
cggccggaggtgccggcgcggccgttcgtgcatctgcgcgtgcattcggcctattcgctg
ctcgagggcgcgctccaactcggcaagatcgtcggccatgccgtgaaggacgaggcgccg
gcgatcgccgtcaccgacaccaacaatctgttcggcgcgctcgaattcgcgcagaaggcg
gtgaaggagggtatccagccgatcatcggctgccagatcgcgctcgccttttccggcgaa
aacagcgacggccagcgggatcgccggcggcaaggcccggaaatgcggccggtcgttctg
ctcgccgcgaccgaagccggttattccaacctggtcaggctggtcagccgcgtctatctg
gaaacaccgcccggcgaggcggtgcatctgacgaccgagatgctggagggaaaggccgat
gggctgatctgcctcagcggcgggccacgcggcccgatcggcaacgccttgaaggaggat
cgccgcgatctggccgaggttcggcttttgacgctcaaggcgatgttcggcgaccggctc
tatgtcgaattggaccgggtcgcgggctatgaccgggtcatcgaacatcagacgatcgat
ctcgcctatgcacacgaacttccgcttgtcgccaccaacgaggcgtttttctcttcacgc
gacgattatgaggcgcatgacgcgctgatcgccatcgccgagggctccgtcgtcgctgtc
gatacccgccgccggttgtcgccggacaatttcctgcgcagccaggccgacatggcaaag
ctgttcgccgacctgccggaagcgatcgacaatacggtcgagatcgcccagcgctgttcc
tattatccgaaaacccgcagcccgatcctgccacgcttcactggcggcgatgcctccgac
aaggatgcggccgaaaaggccgaggccgcggagctcgcccgccaggcgcgtgaggggctc
gacgcacggctcgccctgcacggaccaactccgggctacacggtcgagcagtatcgcgaa
cggctggaattcgagctcggcatcatcgagaagatgaaattccccggctacttcctgatc
gttgccgacttcatcaaatgggccaaggcgcaaggcattccggttgggccgggccgtggt
tcgggcgccgggtcgctggtcgcctattcgacgaccatcaccgacatcgatccgctgcgc
ttctcgctgctgttcgagcgcttcctcaatcccgaccgcgtgtcgatgcccgacttcgac
atcgacttctgccaggatcgccgcgaagaggtgatccgctacgtccagcagaaatacggc
cgcgaccaggtcggccagatcatcaccttcggtacactgcaggcccgcgccgtgctccgc
gatgtcggccgcgtgctgcagatgccctatggccaggtcgacaagctgtccaaaatggtg
ccgcagaacccggccaatccggtcaagctggcggacgccattgccaatgagccgcgcttt
gccgaagaggccgagaaggagccgatcgtccagacgctgctcgacatggctcagaagctg
gaaggtctttaccgccacgcttctacgcacgccgccggcatcgtcatcggcgaccggcct
ttgtcggaactggtgccgatgtaccgcgatccgcgctcggacatgccggtcacccagttc
aacatgaaatatgtcgagcaggccgggctggtgaagttcgacttcctcggcctgaagacg
ctgaccgtgctggagacggcggtcaagctgatccgccggcgcggtatcgacatcgacctg
gcgacgatcccgctcgacgaccccgagacctacgccatgctgtcgcgcggcgaggtggtc
ggcgtgttccaggtggaaagtgccggcatgcgcaaggcgctgataggcatgcggcccgac
tgcatcgaggacatcatcgcgctcgtcgccctctaccggccaggcccgatggagaacatc
ccgacctacaatgccagaaagcatggcgaggaggagatggcctcgatccatcccaagatc
gaccatctggtgaaggagacgcaaggcgtcatcgtctaccaggaacaggtgatgcagatt
gcgcaggagctgtccggctattcgctcggcgaggccgaccttctgcgccgcgccatgggc
aagaagatccgcgccgagatggacaagcagcgcgagcgctttgtctcgggtgcggtcgag
cgcggtgtcagcaagacgcaagccgactttattttcgacctgctggccaagttcgccgac
tacggtttcaacaagtcgcacgcagccgcctacgccgtggtctcgtaccagaccgcctat
ctcaaggcgcattatccggtcgagttcctggccgcgtcgatgacgctcgatatgggcaat
accgacaagctcgccgacttccgccaggacgcgctgcgcctcggcatcgaggttctggcg
ccgtcggtgatgacgagttttcggcctttcgaggtcggcgagaaccgcatctattattcg
atggccgcactcaagggcgtcggcgacgcggcggtcgagcacatcgttgccgtgcggggc
gaaaaaccgttcaagaatctcgcggatttctgcgagcgggtcgatcccaagatcgtcggc
aagcgcgtcttcgaaagcctgatcatggccggcgcgctcgactgcttcggccatgatcgc
gcccagatgatggctggcgtcgaacggatgatgggattggcgtcacttgcccagcagaac
gccgtttccggccaggccgatattttcggcgcctcactcggcgctcagtcgcaggcgttg
aacctgccggcgacggacccatggctcgccgccgaccggctgcaccgcgagttccaggtc
gtcggtttctatctctcggcccatccgctcgacgaatacaaggcggccttgcagaagatg
cgggtgcagaactgggcggagttctcggccgccgtcaagcgcggcgcttctgccggccgc
ctggcaggcacggtgaccagcaaacaggagcgcaagacgcgcaccggcaacaagatgggc
gttgtggccttttccgatacttccggccagtacgaggccgtgctgttttccgaagcgttg
gcgcagtaccgtgacttgctggaagccggccgctccgtcgtgatcaccgtcgcggccgag
gaccggcccgagggcgtcaatttgcgcatcaactccgtgcaatcgctggaggaggaggca
agccgtatccagaaggcgctgcgcatattcgtcaggaacgatggacccgcctcgataatc
cagtcccagctcacccagcgcggtgaaagccaggtgagcatcatcgtaatcaaggaagag
gcccagggcgaggtcgagatcgctttgcagggcggctaccgcgtctcgccgcagatcgcc
tcggcgatgcgcgccgtgcccggcgtggtcgaagtggaactggtgtga
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