Mesorhizobium huakuii: MCHK_6349
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Entry
MCHK_6349 CDS
T06432
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
mhua
Mesorhizobium huakuii
Brite
KEGG Orthology (KO) [BR:
mhua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mhua03019
]
MCHK_6349 (hrpB)
Enzymes [BR:
mhua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MCHK_6349 (hrpB)
Messenger RNA biogenesis [BR:
mhua03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
MCHK_6349 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
DEAD
Helicase_C
ResIII
AAA_30
AAA_25
DUF6630
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AID34134
LinkDB
All DBs
Position
complement(223844..226306)
Genome browser
AA seq
820 aa
AA seq
DB search
MTTRSLPELPVSAVLPALSEALGAGNSAVLVAPPGAGKTTLVPLALLDAPWMGTGKIILL
EPRRLAARAAARRMAQLLDEEPGATVGYAMRMENRSSAKTRILVVTEGVLARMILDDPEM
PGVSAVIFDEFHERSLDGDFGLALALDVQGALRPDLRLLVMSATLDGARVAKLLSGAPVI
ESEGRAFPVDIGYDERPAGVPIEDAMAKAIRAALADESGSVLAFLPGQREIERTAERLAG
KVGADTDIVPLYGQLDGKAQDAAIKPAPAGRRKVVLATSIAETSITIDGVRVVIDSGLSR
LPRYEPASGLTRLETVRVSKASADQRAGRAGRTQAGVAIRLWRAEQTAALPAFTPPEILE
ADLSGLLLDCAAFGVADPTGLAFLDPPPAPALNEARVLLRALHAIDEAGRLTGAGASMRK
LALPVRLAHMVAEAARSGHAGEAAMLAVLLTERGLGGDGADLERRLMRFRGERSSRATAA
RQLAERLARQVGAAKDSEAAPAGSLLINAWPDRVAKARGERGRFVLANGSGAMLDAADPL
AGEPFLVVADLQGKAQNARIAAAAAIGEDDIRATLADRIETRRQTSFDRERRAVRVRETV
RLGAITLAERMLPAPSGADADRAITDALREHGLSLLSWSKEAETLRQRLSWLHRGLGSPW
PDMSDEALIERLDDWLLPFLSGAASLAAIDPGVVSAGLASLVPHELQRKVDALAPTHFDA
PSGSHVPIRYDGEWPVLAVRVQELFGLDRHPSIANCTVPLTLELLSPAHRPIQTTRDLPG
FWRGSWADVRADMRGRYPKHVWPENPLLAAATARAKPRGT
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaagatccctgccggagcttccggtatccgccgtgctcccggcgctcagcgaa
gcgctcggtgccggcaacagcgccgtgctggtggcgccgcccggcgccggcaagacgacg
ctggtgccgctggcgctgctcgatgcgccgtggatgggcacaggcaagatcatcctgctc
gaaccgcgccggctcgccgcccgcgccgccgcgcgccgcatggcgcaattgcttgacgag
gagccgggcgcgaccgtcggctatgccatgcgcatggaaaaccgcagctcggccaagacc
cgcatattggtcgtcaccgagggcgttctggcgcgcatgatcctcgacgatcccgaaatg
cccggcgtctcggcggtcatcttcgacgaattccacgaacgttcgctcgacggcgatttc
ggcctggcgctggcgctcgacgtgcagggcgcactgcggccggatctcaggctgctggtg
atgtcggcgacgctcgatggcgcgcgcgtcgcaaaactcctgtcgggcgcgcctgtgatc
gaaagcgagggccgcgctttccccgtcgatatcggctacgacgaacggccggccggcgtc
ccgatcgaggatgcgatggccaaggcgatccgcgccgcccttgccgatgagagcggcagc
gtgcttgccttcctgcccggccagcgcgagatcgagcgcaccgccgaacggctggccggc
aaggtcggcgccgacaccgacatcgtgccgctctatggccagctcgacggcaaggcgcag
gacgccgcgatcaagccggcgccggcgggccgccgcaaggtggtgctggcgacgtcgatt
gccgagacctccatcaccatcgacggcgtgcgcgtcgtcatcgattccggcctgtcgcgg
ctgccgcgctatgagccggcaagcggcctgacgcggctggagacggtgcgcgtcagcaag
gcctccgccgaccagcgtgccggccgtgccgggcgcacgcaagccggcgtcgccatccgg
ctctggcgcgccgaacagaccgcggcactgcccgccttcacgccgccggaaatcctcgaa
gcggacctttcaggcctgctactcgactgtgccgcctttggtgtggccgatccgaccggc
ctcgctttcctcgatccgccgccggcgccggcgctcaacgaggcaagggtgctgctgcgc
gcgctccatgccatcgacgaggcggggcgcctgacgggagcgggcgcttcgatgcgcaag
ctcgctctgccggtgcggcttgcacatatggtcgccgaagctgcgcggagcggccatgcg
ggcgaggcggccatgctggcggtgctgctcaccgaacgcggccttggtggcgacggcgcc
gatctggagcggcggctgatgcgctttcggggggaaagatcgtcccgcgccaccgccgcc
cggcaactcgcggagaggctggccaggcaggtgggcgcggcgaaagacagtgaagcagca
ccggccggttctcttctcatcaacgcctggccggaccgcgtcgccaaggcgcgcggcgag
cgcggccgtttcgtgttggccaatggctctggcgccatgctcgatgccgccgacccgctg
gcgggcgagccgtttctggtcgtcgccgacctgcagggcaaggcgcagaacgcccgcatc
gcggccgctgcggcaataggcgaggacgacatccgcgccacgctggccgaccggatcgaa
acgcgtcggcaaaccagcttcgaccgagagcgccgcgccgtgcgtgtgcgtgagacggtg
cgcctcggcgccatcacgctcgccgaacgcatgctgccggctccttcaggcgccgatgcc
gaccgcgccataacagatgcgttgcgcgagcacggcctgtcactgctgagctggagcaag
gaggccgagacgctgcgccagcggctgtcctggctgcatcgtggccttgggtccccctgg
cccgatatgtcggacgaagcgctgatcgagcgcctcgacgactggctgctgcccttcctg
tctggggcggcttccctggccgccatcgatcccggtgtcgtctcggctggcctcgcctcg
ctcgtgccgcacgagctgcagcgcaaggtcgatgcgctggcgccgacgcatttcgacgcc
ccgtccggcagccatgtgccgatccgctatgacggcgaatggcctgtgcttgcggtgcgc
gtgcaggaactgttcggcctcgaccgccacccctcgattgccaactgcaccgtgccgctg
acgctcgaactcttgtcgccggcgcaccggccaatccagacgacgcgcgacctgcccggc
ttctggcgtggctcctgggccgacgtgcgcgccgacatgcgcgggcgctatcccaaacat
gtctggccggagaatccgctgctggcggcggctaccgcccgcgcgaaaccgcgcggcacc
tag
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