Mesorhizobium huakuii: MCHK_6547
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Entry
MCHK_6547 CDS
T06432
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mhua
Mesorhizobium huakuii
Pathway
mhua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mhua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MCHK_6547 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mhua03019
]
MCHK_6547 (pnp)
03016 Transfer RNA biogenesis [BR:
mhua03016
]
MCHK_6547 (pnp)
Enzymes [BR:
mhua01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
MCHK_6547 (pnp)
Messenger RNA biogenesis [BR:
mhua03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MCHK_6547 (pnp)
Transfer RNA biogenesis [BR:
mhua03016
]
Prokaryotic type
tRNA degradation factors
MCHK_6547 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
AID34330
LinkDB
All DBs
Position
complement(13781..15928)
Genome browser
AA seq
715 aa
AA seq
DB search
MFNQHKVEIEWGGRPLILETGKIARQADGAVLATYGETKVLATVVSMKEPKPGLDFFPLT
VNYQEKTYAAGKIPGGYFKREGRPSEKETLVSRLIDRPIRPLFADGYKNDTQIVVTVVQH
DLENDPDILSIVATSAALTLSGVPFMGPVGGARVGYINGEYVLNPHIDEMQESKLDLVVA
GTADAVLMVESEAKELGEELMLGAVMFGHKGFQPVIDAIIKLAEVAAKEPRDFTAPDYSA
LEGEMLKIVGDELSNAYKITDKQQRYAAVDAVKAKVKAAFAPAEGEEAKYTSEQIGSVFK
ELQAKVVRWNILDTGSRIDGRDLKTVRKIVSEVGVLPRTHGSALFTRGETQALVVATLGT
GEDEQYVDSLTGMYKEKFLLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIRPMLPSA
DQFPYTLRVVSEITESNGSSSMATVCGTSLALMDAGVPLAKPVAGIAMGLIKEGERFAVL
SDILGDEDHLGDMDFKVAGTANGITSLQMDIKIEGITEEIMKIALDQAKDGRQHILGEMA
HALTGARPELGEFAPRIEVMHIPTDKIRDVIGSGGKVIREIVEKTGAKINIEDDGTVKIA
SSNAKEIEAAKKWIHTIVAEPEVGEIYEGTVVKTADFGAFVNFFGPRDGLVHISQLANER
VAKTSDVVKEGDKVWVKLMGFDERGKVRLSMKVVDQATGKEIVRDKKAEGEEDAA
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatcagcacaaagtggaaatcgaatggggcggtcgcccgctcatcctcgaaacc
ggcaagatcgcccgtcaggctgacggcgccgtgctcgccacctacggcgagaccaaggtt
ctggccaccgtcgtttcgatgaaggagcccaagcccggcctcgatttctttccgctgacc
gtcaactaccaggaaaagacctatgccgccggcaagatcccgggcggctatttcaagcgg
gaaggccgtccgagcgaaaaggaaacgctggtttcgcgcctcatcgaccgcccgatccgt
ccgctcttcgccgacggctacaagaacgacacgcagatcgtcgtcaccgtcgtccagcac
gatctcgaaaatgatccggacatcctgtcgatcgtcgccacctcggccgccctgaccctg
tcgggcgttcccttcatgggcccggtcggcggcgcgcgcgtcggctacatcaacggcgaa
tacgtcctgaacccgcacatcgacgaaatgcaggaatccaagctcgacctcgtcgtcgcc
ggcaccgccgacgccgtgctgatggttgagtcggaagccaaggaacttggcgaagagctg
atgctcggcgctgtcatgttcggccacaagggcttccagccggtcatcgacgccatcatc
aagctggccgaagtcgccgccaaggagccgcgcgacttcaccgcgccggactattccgcg
cttgaaggcgagatgctgaagatcgtcggcgacgagctcagcaatgcctacaagatcacc
gacaagcagcagcgctatgccgccgtcgacgccgtcaaggcgaaggtcaaggcagccttt
gctccggccgaaggcgaagaggccaagtacacctccgagcagatcggctcggtgttcaag
gaactccaggccaaggtcgtgcgctggaacatcctcgacaccggctcgcgcatcgacggc
cgcgacttgaagacggtccgcaagatcgtttcggaagtcggcgtcctgccgcgcacccat
ggttcggccctgttcacgcgcggcgagacccaggcgctggtcgttgccacgctcggcacc
ggcgaagacgagcagtatgtcgattcgctgaccggcatgtacaaggagaagttcctcctt
cactacaacttccctccctattccgtgggtgagaccggccgcatgggttcgccgggccgc
cgcgaaattggccacggcaagctcgcctggcgcgccatccgtccgatgctgccgagcgct
gaccagttcccctacacgctgcgcgtcgtctcggagatcaccgagtccaacggctcgtcc
tcgatggccaccgtctgcggcacctcgctggcgctgatggatgccggcgtgccgctggcc
aagcccgttgccggtatcgccatgggcctgatcaaggaaggtgagcgcttcgccgtgctc
tccgacatcctgggcgacgaggatcacctcggcgacatggacttcaaggtcgccggcacc
gccaacggcatcacctcgctgcagatggacatcaagatcgagggcatcaccgaggagatc
atgaagatcgcgctggatcaggccaaggacggccgccagcatatcctcggcgaaatggcg
catgccctgaccggcgcccgccccgaactcggcgagttcgcgccgcgcatcgaggtcatg
catatcccgaccgacaagatccgcgatgtcatcggttcgggcggcaaggtcatccgcgag
atcgtcgagaagaccggcgctaagatcaacatcgaggacgacggcacggtgaagatcgct
tcctcgaacgccaaggagatcgaggcggcgaagaagtggatccacaccatcgtcgccgag
ccggaagtcggcgagatctacgaaggcacggtcgtcaagaccgccgacttcggcgccttc
gtcaacttcttcggtccgcgtgacggcctcgtccacatctcgcagctcgccaatgagcgg
gtcgccaagacctcggacgtcgtcaaggaaggcgacaaggtctgggtcaagctgatgggc
ttcgacgaacgcggcaaggtccgcctgtccatgaaggtcgtcgaccaggccacaggcaag
gaaatcgtgcgcgacaagaaggccgaaggcgaagaagacgccgcctga
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