Neomoorella humiferrea: MHLNE_02690
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Entry
MHLNE_02690 CDS
T10454
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
mhui Neomoorella humiferrea
Pathway
mhui02020
Two-component system
mhui02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mhui00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MHLNE_02690 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MHLNE_02690 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhui03021
]
MHLNE_02690 (rpoN)
Transcription machinery [BR:
mhui03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MHLNE_02690 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
HTH_17
HTH_23
HTH_Tnp_ISL3
MarR_2
HTH_IclR
Xre-like-HTH
HTH_21
Sigma70_r4_2
Sigma70_r4
HTH_3
HTH_Crp_2
Slx4
HTH_32
HTH_Tnp_4
HTH_Tnp_Tc3_2
AbiEi_4
Phage_CII
DUF2089
Motif
Other DBs
NCBI-ProteinID:
WXJ80931
LinkDB
All DBs
Position
256658..258040
Genome browser
AA seq
460 aa
AA seq
DB search
MRERLGLSLEQTQKLIMTPELRQAIVVLQLSTLELAEYLQQELQENPLLEIKDEEEIAAV
EELENDSESFEIDWQEFFQDRSDLGYVRAPREERPEVNYQNFISGQTSLQDHLLLQLKIA
AKTERELEIGTFLIGNLDANGYLKIDIKEAAECLKVSPTAVWQVLQVIQRFDPPGVGARN
LAECLLIQLRQRRDAPAAAEKIIRHFLPDIAAGRLKRVAKRLDMSLPAVQEVVDYIRTLD
PKPGRAFGGGENRYIVPDVIIERVDDDYVVLLNDLAMPRLGINPYYQALMRQEGGCDPAT
KRFIESKLNAATWLMRSLEQRRLTLYRVVSCLVQEQREFLDKGLKYLKPLTMRQVAAALG
IHESTVSRATANKYVQTPWGIFELKFFFASGVERRGGAAAAESIKKIIVEAINSEDPANP
LTDQQLQELLQRQGIKISRRTVAKYRDEQGIPAATRRKRY
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgaacgcctgggccttagcctggaacagacgcaaaagctaattatgacgcctgaa
ctgcgccaggccattgttgttctgcagctctccaccctggagctggccgagtatttgcag
caggaattacaggaaaatcctttgttagaaataaaggacgaagaagaaatagctgctgta
gaagaattggaaaatgacagtgaatcttttgagatcgactggcaggagtttttccaggac
cgcagcgatttgggttatgtcagggcgcccagggaagagcggcccgaagtcaattatcag
aatttcataagcggccagacttccctgcaggaccaccttctcctgcagttaaagattgcg
gcaaagacggaacgtgagctggagataggcaccttcctcatcggtaatttggacgccaac
ggatatttaaaaatcgacattaaagaagcggcagaatgtttaaaggtttccccgaccgcc
gtctggcaggtgctgcaggtcatccagcgcttcgatcctcccggggttggggccagaaat
ctcgcggaatgcctgctgatccagctacgccagcgtcgtgatgcccctgcggccgccgaa
aaaattatccgtcattttttaccggatatcgctgccggacgtttaaaacgggtggccaag
cggctggatatgagcctgccggcagttcaggaagtggtagattacatccgcaccctggac
cccaaaccggggcgtgccttcggtggcggcgaaaatcgttatatagtccccgatgtaatc
atcgagcgcgtcgatgacgactacgttgttttattgaatgatctggctatgccccgcctg
gggatcaacccttattaccaggcccttatgcgccaggaggggggctgcgacccggcgacg
aagcgtttcatagaaagtaaacttaatgcggcaacatggctgatgcgtagtttagaacag
cgccggttgaccctctaccgggtggtcagctgcctggtacaggagcagagggaatttctc
gataaaggcctaaaatatctgaaacccctgaccatgcgccaggtagcggcggctttaggc
atccatgaatctaccgtcagccgggctacggctaacaagtacgttcagacgccttggggt
atatttgaactgaagttctttttcgccagcggggtagaaaggcgaggaggcgcagccgcc
gccgagagcatcaaaaaaattatcgttgaagctatcaatagcgaggaccccgccaatccc
ctgaccgatcagcagcttcaagaattgcttcagcgccagggtataaaaatctcccggcgc
acggtggccaaatatcgcgacgagcagggcataccggcggcaaccaggaggaaacgctat
taa
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