Microcella humidisoli: NNL39_06460
Help
Entry
NNL39_06460 CDS
T09551
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mhum
Microcella humidisoli
Pathway
mhum03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mhum00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NNL39_06460 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhum03021
]
NNL39_06460 (rpoB)
03400 DNA repair and recombination proteins [BR:
mhum03400
]
NNL39_06460 (rpoB)
Enzymes [BR:
mhum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NNL39_06460 (rpoB)
Transcription machinery [BR:
mhum03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NNL39_06460 (rpoB)
DNA repair and recombination proteins [BR:
mhum03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NNL39_06460 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Peptidase_M23
PCB_OB
DUF8659
Motif
Other DBs
NCBI-ProteinID:
UTT61339
UniProt:
A0ABY5FT75
LinkDB
All DBs
Position
1352828..1356319
Genome browser
AA seq
1163 aa
AA seq
DB search
MAAARTAKNQSPKNGRTASRLSFAKISDTLTVPDLLALQTESFDWLVGNDAWKARLAEAQ
AAGRTDVPTHSGLEEIFEEISPIEDLGETMQLSFTNPYLEEQKYSIDECKERGKTYAAPL
YVEAEFMNHMTGEIKTQTVFMGDFPLMTEKGTFIINGTERVVVSQLVRSPGVYFERQLDK
TTDKDVYTARIIPSRGAWLEFEVDKRDQVGVRIDRKRKQSVTVFLKALGLTTEEIREKFA
GFESIEQTLEKDAILTKEEALKDIYRKLRPGEQVAAEAARALLDNFYFNPKRYDLAKVGR
YKLNRKLGLDAPLADSVLSVDDIVATIRYMVSLHESRTTLPGQRDGKPVELRLDVDDIDH
FGNRRIRAVGELIQNQVRTGLSRMERVVRERMTTQDIEAITPQTLINVRPVVAAIKEFFG
TSQLSQFMDQNNPLAGLTHKRRLSALGPGGLSRERAGVEVRDVHPSHYGRMCPIETPEGP
NIGLIGSLASFARINAFGFIETPYRRVTKGKVTATIDYLTASEEDDHVVAQAGAPLNKDG
SFAEERVLVRRKGGEVELVPSEQVDYMDVSPRQMVSVATSLIPFLEHDDANRALMGANMQ
RQAVPLLRSESPLVGTGMESYAAVDAGDVITATAAGVVTSVSADSVTVQLDEGGTQDYFL
RKFDRSNQGTNYNHRVVVSAGDRIEVGEVIADGPATENGELALGKNLLVAFMSWEGHNFE
DAIILSQNLVKDDTLSSIHIEEYEVDARDTKLGKEEITRDLPNVSPELLADLDERGIIRI
GAEVRPGDILVGKVTPKGETELSAEERLLRAIFNEKSREVRDTSLKVPHGEQGTIIGVKV
FDAQDGDDELGSGVNQRVVVYIAQKRKISEGDKLAGRHGNKGVISKILPVEDMPFLEDGT
PVDIVLNPLGVPGRMNFGQVLEIHMGWAASRGWKIEGTPEWAEGIPANAREAAPGTKIAT
PVFDGAREDEIAGLLDSTLPNRDGVRMIDSTGKARLFDGRSGEPFPDPISVGYMYILKLH
HLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKSD
DILGRVKVYEAIVKGENIQEPGIPESFKVLIKEMQSLCLNVEVLSADGSVLSLKDTDDEV
FRAAEELGINISTRFESSSIDEI
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
ttggctgctgcgcgcaccgctaagaaccagtcccccaagaacggccgcaccgcatcgcgg
ctctctttcgccaagatcagcgacacgctgaccgttcccgacctgctcgccctgcagacg
gagagcttcgactggctcgtcggcaacgacgcctggaaggctcgactcgccgaggcgcag
gccgctggccgcaccgacgtgccgacgcacagcgggctcgaggagatcttcgaggagatc
tctccgatcgaggacctgggcgagacgatgcagctctcgttcacgaacccctacctcgaa
gagcagaagtactcgatcgacgagtgcaaggagcgcggcaagacctacgccgccccgctc
tacgtcgaggccgagttcatgaaccacatgaccggtgagatcaagacccagacggtcttc
atgggcgacttcccgctcatgaccgagaagggcaccttcatcatcaacggcaccgagcgt
gtcgtggtgtcgcagctcgttcgctcgcccggcgtctacttcgagcgccagctcgacaag
acgaccgataaggacgtctacaccgcgcgcatcatccccagccgcggcgcctggctcgag
ttcgaggtcgacaagcgcgaccaggtcggcgtgcgcatcgaccgcaagcgcaagcagtcg
gtcacggtgttcctcaaggccctcggtctgacgaccgaggagatccgcgagaagttcgcc
ggcttcgagtcgatcgagcagaccctcgagaaggacgccatcctcactaaggaggaggcc
ctcaaggacatctaccgcaagctgcgcccgggcgagcaggtcgccgccgaggctgcgcgc
gcgctgctcgacaacttctacttcaacccgaagcgctacgacctcgcgaaggtgggccgt
tacaagctcaaccgcaagctgggtctggatgcgccgctcgccgactcggtgctgagcgtc
gacgacatcgtcgcgacgatccgctacatggtgtcgctgcacgagtcgcgcacgaccctg
ccgggtcagcgtgacggcaagcccgtcgagctgcgtctcgatgtcgacgacatcgaccac
ttcggcaaccgtcgcatccgcgccgtgggcgagctcatccagaaccaggtgcgcacgggt
ctcagccgcatggagcgcgtcgtgcgcgagcgcatgaccacgcaggacatcgaggcgatc
acgccgcagaccctgatcaacgtgcgccccgtcgtggccgcgatcaaggagttcttcggc
acctcgcagctgagccagttcatggaccagaacaacccgctcgcgggcctcacccacaag
cgccgcctgtcggcgctcggcccgggtggcttgtcgcgcgagcgcgccggcgtcgaggtg
cgcgacgtgcacccctcgcactacggccgcatgtgccccatcgagaccccggaaggcccg
aacatcggcctcatcggctcgctcgcctcgttcgcgcgcatcaacgcgttcggcttcatc
gagaccccgtaccgccgcgtcaccaagggcaaggtcacggcgacgatcgactacctgacc
gcgagcgaggaggacgaccacgtcgtcgcccaggccggtgcgccgctcaacaaggacggg
tcgttcgccgaggagcgcgtgctcgtgcgtcgcaagggcggcgaggtcgagctcgtgccg
tcggagcaggtcgactacatggacgtctcgccgcgccagatggtgtcggtcgcgacctcg
ctcatcccgttcctcgagcacgacgacgcgaaccgcgccctcatgggtgccaacatgcag
cgtcaggccgttccgctgctccgttccgagtcgccgctcgtcggcaccggcatggagagc
tacgcggccgtcgacgccggcgacgtcatcaccgccacggcggccggtgtcgtcacctcg
gtctcggccgactcggtcacggtgcagctcgacgagggcggaacgcaggactacttcctg
cgcaagttcgaccgctcgaaccagggcacgaactacaaccaccgcgtcgtcgtcagcgcg
ggcgaccgcatcgaggtcggcgaggtcatcgccgatggcccggccaccgagaacggcgag
ctcgcgctcggcaagaacctgctcgtcgcgttcatgtcgtgggaaggccacaacttcgaa
gacgcgatcatcctcagccagaacctcgtgaaggacgacacgctgtcgtcgatccacatc
gaggagtacgaggtggatgcgcgcgacacgaagctcggcaaggaagagatcacccgtgat
ctgccgaacgtgagccccgagctgctggccgacctcgacgagcgcggcatcatccgcatc
ggtgccgaggtgcgccccggcgacatcctcgtcggcaaggtcacgcccaagggcgagacc
gagctctcggccgaggagcgcctgctgcgcgcgatcttcaacgagaagtcgcgcgaggtg
cgcgacacctcgctcaaggttcctcacggcgagcagggcacgatcatcggcgtcaaggtg
ttcgacgcgcaggacggcgacgacgagctcggctcgggcgtcaaccagcgcgtggtcgtc
tacatcgcccagaagcgcaagatctccgagggcgacaagctcgccggccgccacggcaac
aagggcgtcatctcgaagatcctgccggtggaggacatgccgttcctcgaggacggcacg
cccgtcgacatcgtgctcaacccgctcggcgtccccggtcgcatgaacttcggccaggtg
ctcgagatccacatgggctgggcggcatcgcgcggctggaagatcgagggcactcccgag
tgggccgagggaatcccggccaacgctcgcgaggcggcgcccggcacgaagatcgcgacg
cccgtgttcgacggtgcgcgcgaggacgagatcgccggtctgctcgactcgacgctcccg
aaccgcgacggtgtgcgcatgatcgactcgaccggaaaggctcgtctcttcgacggccgc
tcgggcgagccgttccccgacccgatctcggtcggctacatgtacatcctgaagctccac
cacctcgtcgacgacaagatccacgcgcgctcgacgggcccctactcgatgatcacgcag
cagcccctgggcggtaaggcccagttcggcggccagcggttcggtgagatggaggtgtgg
gcgctcgaggcctatggtgcggcgtacgcgctgcaggagctcctgacgatcaagtccgac
gacatcctcggccgcgtgaaggtctacgaagccatcgtcaagggcgagaacatccaggag
cccggcattcccgagagcttcaaggtgctcatcaaggagatgcagtcgctgtgcctgaac
gtcgaggtcctctcggccgacggctccgtgctcagcctgaaggacacggatgacgaggtc
ttccgcgccgcagaggagctgggcatcaacatctccacccgcttcgagtcctcgtcgatc
gacgagatctga
DBGET
integrated database retrieval system
