Microcella humidisoli: NNL39_11185
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Entry
NNL39_11185 CDS
T09551
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mhum
Microcella humidisoli
Pathway
mhum03030
DNA replication
mhum03430
Mismatch repair
mhum03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mhum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NNL39_11185 (dnaE)
03430 Mismatch repair
NNL39_11185 (dnaE)
03440 Homologous recombination
NNL39_11185 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mhum03032
]
NNL39_11185 (dnaE)
03400 DNA repair and recombination proteins [BR:
mhum03400
]
NNL39_11185 (dnaE)
Enzymes [BR:
mhum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NNL39_11185 (dnaE)
DNA replication proteins [BR:
mhum03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NNL39_11185 (dnaE)
DNA repair and recombination proteins [BR:
mhum03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NNL39_11185 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
FAD-oxidase_C
DUF5487
Motif
Other DBs
NCBI-ProteinID:
UTT63819
UniProt:
A0ABY5FZQ8
LinkDB
All DBs
Position
2289522..2292983
Genome browser
AA seq
1153 aa
AA seq
DB search
MLDGAARVKPLIAEAVEQGMPAIAVTDHGNMFGAFDFWKTATDAGIKPIIGIEAYLTPGT
HRTDKTRVKWGVGGEDDVSGAGAYTHLTMLAASTTGMHNLFRMSSLASIEGYYFKPRMDR
ELLSRYAEGVIATTGCVSGEVQTRLRLGEYDKAREAAAEFRDIFGAENYFVEIMDHGLPI
ERRTMTELIRLAKDLGLPLVATNDLHYTHAGDAGSHAALLCVQSGSTLDDPNRFKFDADE
FYLKTPAQMRELFRDYPEACDNTLLIAERADVAFNTSANYMPRYPVPEGETENSWFIQEV
ERGLAVRYPGGVPDAVRARAEYEIGVITQMGFSGYFLVVADFINWSKRNGIRVGPGRGSG
AGSMAAYAMRITDLDPLEHGLIFERFLNPDRVSMPDFDVDFDDRRRGEVIRYVTEKYGDE
RVAQIVTYGTIKAKQALKDSSRVLGFPFGMGEKLTKAMPPAIMGKDMPLAGILDRTHERY
KEAADFRAIIEVDAEARTVFDTALGLENLKRQWGVHAAGVIMSSEPLIDIIPIMKREQDG
QIVTQFDFPASEALGLVKMDFLGLRNLTIIDDALDNIEANRGTRLVLEDLTLDDPAAYEL
LARGDTLGVFQLDGGPMRSLLRMMKPDNFEDISAVLALYRPGPMGADSHTNYALRKNGRQ
EITPIHPELAEPLEEVLGGTYGLIVYQEQVMEIAQKLAGYTLAQADLLRRAMGKKKKEEL
DKQYENFRAGMAANGYSEAAVKTLWDILVPFSDYAFNKAHSAAYGVVSYWTAYLKAHYPA
EYMAALLTSVGDSKDKMAVYLNECRRMGITVLPPDVNESIGFFAAVGDDIRFGLGAVRNV
GFAVVEHIRAAREEKGRFTGFFDFLKKVPSPVANKRAIESLIKAGAFDSLGATRRALMEI
HEGAVEAAVKEKRAEEVGDVGFDFDSLFEDAEQSTEHVPDRPEWAKKDKLAFEREMLGLY
VSDHPLAGLERALAQHAGTGIAELNDNPPADGEQVTVAGLITSVQHRVARQSGNPYGMIT
LEDFGGEISIMFLGKSYLEFGAKLVADSIVVVRGRVNHRDDGITLQAMVLQQPELGVSAE
TGPLTLSVREQRATVDVVSELDSVLSRHRGSTEVRLRLVRDDSARVFELPHRVEPSAGFF
GEVKSLLGPRALL
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacggcgccgcgcgcgttaagccgctcatcgccgaagcggtcgagcagggcatg
cccgcgatcgcggtcaccgaccacggcaacatgttcggcgccttcgacttctggaagacc
gcgaccgacgcgggcatcaagcccatcatcggcatcgaggcgtacctcacgccgggaacc
caccgcaccgacaagacgcgcgtcaagtggggcgtcgggggagaggacgacgtgtcgggc
gcgggcgcctacacgcacctcacgatgctcgcggcctcgacgacgggcatgcacaacctg
ttccgcatgtcgtcgctggcctcgattgagggctactacttcaagccccgcatggaccgc
gagctgctgagccggtacgccgagggcgtcatcgcgacgacgggctgcgtgagcggcgag
gtgcagacccgcctgcggctgggggagtacgacaaggcccgcgaggccgccgccgagttc
cgcgacatcttcggcgccgagaactacttcgtcgagatcatggaccacggtctgccgatc
gagcggcgcacgatgaccgagctcatccgactcgcgaaagacctcggcctgccgctcgtc
gccacgaacgacctgcactacacgcacgcgggtgatgccggttcgcacgcggcgctcctc
tgcgtgcagtcgggcagcacgctcgacgatccgaatcgcttcaagttcgatgccgacgag
ttctacctcaagacgcccgcgcagatgcgcgagctgttccgcgactatcccgaggcctgc
gacaacacgctgctgatcgcggagcgcgccgacgtcgccttcaacacctcggccaactac
atgccgcggtacccggttcccgagggggagaccgagaacagctggttcatccaggaggtc
gagcgcgggctggcggtgcggtatccgggcggggttccggatgcggtgcgcgcgcgcgcc
gagtacgagatcggcgtcatcacgcagatgggcttctcggggtacttcctcgtcgtcgcg
gacttcatcaactggtcgaagcgcaacggcatccgcgtcggcccgggccgcggctcgggg
gccggatcgatggccgcctacgccatgcgcatcaccgacctcgaccccctcgagcacggc
ctcatcttcgagcgcttcctcaaccccgaccgcgtctcgatgcccgacttcgacgtcgac
ttcgacgaccgccgccgcggtgaggtgatccgctacgtcaccgagaagtacggcgacgag
cgcgtcgcccagatcgtcacctacggcaccatcaaggcgaagcaggcgctgaaggacagc
tcgcgcgtgctcgggttccccttcgggatgggcgagaagctcaccaaggccatgccgccc
gccatcatgggcaaggacatgcccctcgcgggcatcctcgaccgcacgcacgagcgctac
aaggaggccgccgacttccgcgccatcatcgaggtcgacgccgaggcgcgcacggtcttc
gacaccgcgctcggcctcgagaacctcaagcgccagtggggcgtgcacgcggcgggcgtg
atcatgtcgagcgaaccgctcatcgacatcatcccgatcatgaagcgcgagcaggacggc
cagatcgtcacgcagttcgacttcccggcctccgaggccctcgggctcgtgaagatggac
ttcctcggcctgcgcaacctcacgatcatcgacgacgctctggacaacatcgaggccaac
cgcggcacgcggctcgtgctcgaagacctcacgctcgacgatccggcggcctacgagctg
ctggcgcgcggcgacacgctcggcgtcttccagctcgacggcggacccatgcgctcgctg
ctgcgcatgatgaagcccgacaacttcgaagacatctctgctgtgctcgcgctctaccgt
ccggggccgatgggtgctgattcgcacaccaactacgcgctgcgcaagaacggccggcag
gagatcacgccgatccaccccgagctcgccgagccgcttgaagaggtgctgggcgggacc
tacggcctcatcgtgtaccaggagcaggtcatggagatcgcgcagaagctcgcgggctac
acgctcgcgcaggccgacctgctgcggcgggcgatgggcaagaagaagaaagaggagctc
gacaagcagtacgagaacttccgcgccggcatggcggccaacgggtactccgaggccgcc
gtcaagacgctgtgggacatcctcgtgcccttctccgactacgccttcaacaaggcccac
tcggcggcgtacggcgtcgtctcgtactggaccgcgtacctcaaggcgcactacccggcc
gagtacatggcggccctgctgacgagcgtgggcgattcgaaagacaagatggcggtctac
ctcaacgagtgccgccgcatgggcatcacggtgctgccgcccgatgtcaacgagtccatc
ggattcttcgcggccgtcggcgacgacatccggttcggcctcggcgcggtgcgcaacgtc
ggcttcgcggtcgtggagcacatccgcgcggcacgcgaggagaagggccgcttcacgggc
ttcttcgacttcctcaagaaggtgccgtcgcccgtcgcgaacaagcgcgcaatcgagtcg
ctcatcaaggccggggccttcgattcgctcggcgcgacccggcgggcgctcatggagata
cacgagggcgccgtcgaggccgcggtcaaggagaaacgggcggaggaggtcggcgacgtc
ggcttcgacttcgacagcctcttcgaggatgccgagcagagcaccgagcacgttcccgac
cggcccgagtgggcgaagaaggacaagctcgcgttcgagcgcgagatgctcgggctctat
gtctccgatcaccccctcgccgggctcgagcgcgcgctcgcgcagcacgctggcacgggc
atcgccgagctcaacgacaatccgcccgccgatggtgagcaagtgacggtcgcgggcctc
atcacgagcgtgcagcaccgcgtggcacgccagtcgggcaacccctacggcatgatcacg
ctcgaagacttcggtggcgagatcagcatcatgttcctcggcaagagctacctcgagttc
ggcgccaaactcgtcgccgacagcatcgtggtcgtgcgcggccgcgtgaaccaccgcgac
gacggcatcaccctgcaggcgatggtgctgcagcagcccgagctgggagtgagcgctgag
acgggcccgctcacactctcggtgcgcgagcagcgcgcgaccgtcgacgtcgtgagcgag
ctcgactcggtgctctcccgccaccgcgggtcgaccgaggtgcgccttcggctcgtgcgc
gacgattcggcgcgcgtcttcgagctgccgcaccgcgtcgagccctccgccgggttcttc
ggcgaggtgaagagcctgcttggaccgcgcgcgctgctctag
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