KEGG   Megasphaera hexanoica: ACT01_03735
Entry
ACT01_03735       CDS       T05536                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
mhw  Megasphaera hexanoica
Pathway
mhw03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mhw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ACT01_03735
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mhw03019]
    ACT01_03735
Messenger RNA biogenesis [BR:mhw03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     ACT01_03735
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1 Lactamase_B_6 SrfA
Other DBs
NCBI-ProteinID: AXB81420
UniProt: A0A848BVT1
LinkDB
Position
808413..810074
AA seq 553 aa
MAKKEKLLVIPLGGLGEIGKNMTVIQYGDDIVVIDAGLAFPDDDMFGIDLVIPDMSYLIE
NKDKVRAIVITHGHEDHIGSLSYLLNEVNAPVYATKLVCGLIEGKLKENHITNYQLNEVH
HGDEVQIGCMKVGFIHTNHSIPDASALYFRTPVGTIVHTGDFKMDLTPVDGLPMDIHKFA
DLGRRGVLLLMSDSTNAERPGYTESETTVSVAFRKAFGEAKGRIILATFASNISRIQQAI
NTAVLFKRKVTVLGRSMVNNVQIAIDLGYLEVPDGVLIEPDELNRYPADQVLILTTGSQG
EPMAGLSRMASNNHRSVSIMPGDTVIISATPIPGNETGVGRTIDNLMKLGATVIAGRDKR
MHVSGHASQEELKIMLSLIKPKYFIPVHGEYRMLRKHGELAVQMGVAKDHVLIGDNGQIF
EFSNRSGHKTGHVNAGRVFVDGLGVGDVGNIVIRDRQQLAMEGVVIVVMTLAKGTSHALA
GPDIVSRGFVYVRDSEELMREAHEKVAAVLERCEAGNIREWAVIKSQVRDTLSRYLYEKT
RRRPMILPIIMEV
NT seq 1662 nt   +upstreamnt  +downstreamnt
ttggctaagaaggaaaaacttcttgtaattcctctgggaggcctgggtgaaatcggtaag
aacatgaccgttatccagtacggcgatgatattgttgtcatcgatgccgggctggcattt
cctgacgatgacatgttcggtatcgacctggtcatccccgacatgagttacttgattgaa
aacaaagataaagtacgggctattgtcattacgcatggtcatgaagaccacatcggcagc
ttatcctatctgctgaatgaagtgaatgcgcctgtatacgcgacgaaactcgtctgcggt
ctcattgaaggaaagttaaaagaaaatcatattacaaattatcagttaaacgaagtgcat
catggagatgaagtgcagatcggctgtatgaaggtggggttcattcatacgaatcattcc
atccccgatgcgagcgctctctacttccgtacgcctgtaggtaccattgtccatacgggt
gacttcaagatggacctgacaccggtagacggactgcctatggatatccacaaatttgcc
gacctgggccgccgcggcgtactgcttctcatgtcagacagtaccaatgcggaacggccg
gggtatacggagtcggaaacaaccgtcagtgtcgccttccgcaaagccttcggcgaagcg
aaaggccggattatcctggcgacatttgcatccaacatttcccgtatccagcaggctatc
aatacagccgtactgttcaaacggaaagttactgtcctcgggcgcagcatggtcaataac
gtgcagattgccattgatctgggctacctggaagtaccggacggcgtgctcatcgaaccg
gatgaactgaaccgctatccagccgatcaggtgcttatcctgacgacgggcagccagggc
gaacctatggccggcctgtcccgtatggcatctaataatcaccgcagcgtcagcatcatg
cccggtgatacggttattatctcggcaacgccgattccaggcaatgaaaccggtgtgggc
cggactatcgataacctgatgaagctgggcgctacggtcattgccggtcgggataaaaga
atgcatgtttccggccatgccagtcaggaagaattgaagatcatgctcagcctgatcaag
ccgaaatacttcatccctgtccatggtgaataccgcatgctgcggaaacacggggaactg
gccgtacagatgggagtggcgaaagatcacgtcctcatcggcgataacgggcagattttc
gaattctccaaccgttccggccataagacgggccatgtcaatgccggacgcgtctttgtc
gatggcctcggcgtcggcgatgtaggtaatatcgtcatccgggaccggcagcagctggct
atggaaggcgttgtcatcgtcgtcatgaccctggcaaagggcacgagtcatgctctggca
ggcccggatatcgtatcccgtggatttgtctatgtccgggattcagaagaactcatgcgt
gaagcccacgaaaaagtagcagctgtactggaacgctgcgaagccggtaatatccgcgaa
tgggctgtcattaagtcgcaggtccgggatacgctgagccgctatctctatgaaaaaaca
cggcggcgtcccatgattctgcctatcatcatggaagtatag

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