Megasphaera hexanoica: ACT01_05545
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Entry
ACT01_05545 CDS
T05536
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mhw
Megasphaera hexanoica
Pathway
mhw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mhw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACT01_05545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mhw03019
]
ACT01_05545
03400 DNA repair and recombination proteins [BR:
mhw03400
]
ACT01_05545
Enzymes [BR:
mhw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACT01_05545
Messenger RNA biogenesis [BR:
mhw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACT01_05545
DNA repair and recombination proteins [BR:
mhw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACT01_05545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
AXB81740
UniProt:
A0A848BTH6
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All DBs
Position
1189926..1191752
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AA seq
608 aa
AA seq
DB search
MRPLDVLKQYFGYSSFRPGQAEVIATIMEHRDCLAIMPTGAGKSLCFQIPGLLMSGLTLV
ISPLISLMKDQVDALLAQHIPAVFINSQCTLEESRQRFSEIRSGRVKLVYISPERLQNEF
FTSFMQSMPIDMVVIDEAHCVSQWGHDFRPGYCAIRPWIEALPHRPVVAAFTATATQKVK
EDMMNLLGLQDERVFIGGFDRPNLYFRVVRNTDRTSFILSYLARNKEDSGIIYAATRKEV
DRLYKEIKARGFAAGRYHAGMTDGARKKVQEQFTYDKISVIVATNAFGMGIDKSNVRYVI
HYQMPKNIESYYQEAGRAGRDGAPGECILLYNRRDIMIQKFLIENSVHSPEQQKKELQML
NAMIEYCETRHCLRQYILRYFGEKPSWDRCEHCGNCDQEVVQEDTTQIVRPICLCIDEVK
GRFGMTMVCDILKGSMTARIRHYGFQRCTSFGMLSNYAAREIRDMIRQSLEDGFVQQSEG
QYPVLSLTADGRDVLKGRKRAIQEIAIAAETEPAARPARKKKSVSESIDEEACRPLFEVL
RSVRMDLAKKEHIPPFVIFSDATLWEMAASRPVSEEAMSRIKGVGEFKLHKYGRIFCQAV
QDFQTTQR
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
ttgcggcctttagatgtcctgaaacagtattttggctattcatcgttccgccctggacag
gcggaggtcattgccacgatcatggagcatcgtgactgcctggccattatgccgacggga
gccggaaaatcactttgtttccagataccgggattgctgatgtccggccttacactggtc
atttctcccctcatttcattgatgaaagatcaggtagatgcgctgctggcacagcatata
ccggccgtgtttatcaatagccagtgcacactggaagagtcgagacagcggttttcagaa
atacggagtggccgggtcaagctcgtctacatttctcctgaacggctgcagaatgaattt
tttacgagcttcatgcagtctatgccaatcgatatggtcgtcatcgatgaagctcattgt
gtatcccagtggggtcatgatttccggcccgggtattgcgctatccgcccgtggatcgaa
gcactgcctcaccgtccggtggtggcggcctttacggcgacggcgactcagaaggtaaaa
gaagatatgatgaacctcctgggccttcaggatgaacgggtctttatcggcgggtttgac
cgtccgaatctgtacttccgcgtcgtccgcaatacagaccggacttctttcatcctgtcc
tatctggcccggaataaagaggacagcggcatcatctatgcggcgacgcggaaagaggta
gaccgcctgtacaaggaaataaaagcacgcgggtttgccgcagggcggtatcatgccggt
atgaccgatggagcgcgcaagaaggtacaggaacagtttacctatgataaaatttccgtc
attgtagcaaccaatgcctttggcatgggcatcgacaagagcaatgtccggtacgtcatt
cactatcagatgccaaaaaacatcgaaagctattatcaggaagcgggccgggccggacgg
gacggagctcccggagaatgcatcctgctgtataaccggcgtgacatcatgattcagaaa
ttcctcatcgaaaactctgtccattcaccagaacagcagaaaaaagaattgcagatgctg
aacgccatgattgaatattgcgaaacccgtcactgcctgcgccagtatattctccggtat
tttggagaaaaaccatcctgggaccgctgtgaacattgtggcaattgtgatcaggaagtc
gtccaggaagatacgacccagattgtccggccgatttgcctatgtatcgacgaggtgaaa
gggcgttttggaatgacgatggtctgtgatatactaaaggggagtatgactgcccgaatc
cgccattatggtttccagcgctgtacgagctttggcatgctaagcaattatgcggccaga
gaaatccgcgatatgatccggcaaagtctggaagatggattcgtgcagcagtccgaaggg
caataccccgtcctttctctgactgctgacggacgggatgtattgaaaggccggaaacgg
gctatacaggaaattgccatcgcggcagaaacagaaccggcggcccggccggcgcggaag
aaaaaatctgtatctgaatctatcgatgaagaagcctgccggcccctctttgaggtactc
cggtcagttcgcatggatctggcaaaaaaagaacatattccgcctttcgtcattttttcc
gatgccacactttgggaaatggcagccagccgccccgtatcggaagaggcgatgtcccgc
attaaaggggtaggtgagttcaagctgcataaatatggccgcattttttgccaggctgtt
caggattttcaaactacacagaggtga
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