Megasphaera hexanoica: ACT01_07735
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Entry
ACT01_07735 CDS
T05536
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mhw
Megasphaera hexanoica
Pathway
mhw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mhw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACT01_07735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mhw03019
]
ACT01_07735
03009 Ribosome biogenesis [BR:
mhw03009
]
ACT01_07735
Enzymes [BR:
mhw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACT01_07735
Messenger RNA biogenesis [BR:
mhw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACT01_07735
Ribosome biogenesis [BR:
mhw03009
]
Prokaryotic type
rRNA helicases
ACT01_07735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
SecA_DEAD
Cas3-like_C_2
PhoH
Motif
Other DBs
NCBI-ProteinID:
AXB82137
LinkDB
All DBs
Position
complement(1651539..1652804)
Genome browser
AA seq
421 aa
AA seq
DB search
MKTFQTLGVTPELTNLLHTQGINEPTAVQAQSIPAIFKGRDVLAQAQTGTGKTLAFLLPA
LQQIRTDLSREQVLIVAPTRELAKQIADVALTLAPSLSVDVLSLIGGKTIENQLQKLHRH
PHVIIGTPGRLLDHCGRNSLDLSHVRRIIVDEADQMLQSGFLEDIDTLIAMTPSNRQLLF
FSATIPDKIRSLAKKHMTHPLVLNILEGDTIALDTIEQRIYMVQEEKKLDLLCQMLADMN
PYLAIVFCNTKERTSWLAGELIARGFNIGELHGDMSQGRRSQVLRDFSRARTQILVATDI
AARGIDIEGITHVFSYDVPHDVDYYIHRIGRTGRAGSEGLAIMFATAADENWVRRIEHTI
EATITKYAANGQIRVKAKNAAPKKKKVYKDKLPASTYQTTKEKHHKTLHKGGDNRRRRKK
Q
NT seq
1266 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacattccagacactcggcgttacgccggaattaaccaatctattgcatacacag
ggcatcaatgaaccgactgccgttcaggcccagtctattcccgccatattcaaaggacgg
gatgtcctggcccaggcacagaccggtacaggcaaaacgctggcttttctactgccagcc
ctgcagcagatccgtaccgatttatcgcgcgaacaggtgctgattgtcgcacctacgcgt
gaactggccaaacagattgccgacgtggcattgactctggcgccatcgctttctgtcgat
gtgctcagcctgattggcggcaaaaccatcgaaaatcagctccagaagctccatcgccac
ccccacgtcatcattggtacccccggccggcttctcgaccactgtggccgtaattccctc
gatttatcccatgtacggcggatcatcgtcgatgaagccgaccagatgctgcagtcggga
ttcctggaagacattgacacactcattgccatgacgccgtccaacagacagctgcttttc
ttctctgccaccatccccgataaaatccgcagtctggctaaaaagcatatgactcatccg
ttagtcctcaatatccttgaaggcgataccattgctctggatacgattgaacagcggatt
tacatggtccaggaagaaaaaaaactggatcttctctgccagatgctggccgatatgaat
ccctatctggctattgtgttctgcaacacgaaagagcgcacgtcctggctggcgggagaa
ctcattgcccgcgggttcaacatcggtgaactccacggcgatatgagtcagggtcgccgc
agccaggtattgcgtgatttttccagagcccgtacccagattctggtcgcaaccgatatt
gcagcccggggcatcgatatcgaaggcattactcacgttttcagctatgatgtcccccac
gacgtcgattactatatccatcgcataggccgcacgggccgtgccggcagtgaaggattg
gccatcatgtttgctaccgctgccgatgaaaactgggtacgccgtatcgaacacacgatt
gaagcgacaattaccaaatatgccgccaatggtcagatacgggtcaaagcaaaaaacgcg
gcaccaaagaaaaagaaagtatacaaagacaagcttccggccagcacctatcagaccacg
aaagaaaaacaccataaaacattgcataaaggcggagataaccggcgccgtcggaagaaa
caataa
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