Megasphaera hexanoica: ACT01_08540
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Entry
ACT01_08540 CDS
T05536
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mhw
Megasphaera hexanoica
Pathway
mhw03420
Nucleotide excision repair
mhw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mhw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACT01_08540
03430 Mismatch repair
ACT01_08540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhw03400
]
ACT01_08540
Enzymes [BR:
mhw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACT01_08540
DNA repair and recombination proteins [BR:
mhw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACT01_08540
MMR (mismatch excision repair)
Other MMR factors
ACT01_08540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
ResIII
AAA_22
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AXB82280
LinkDB
All DBs
Position
1830885..1833086
Genome browser
AA seq
733 aa
AA seq
DB search
MNPIFATLNERQFEAVQHTEGPLLITAGAGSGKTKVLTCRIAHLLELGIAPYRILAITFT
NKAAREMRERVENLVGAEAERIWLSTFHSFCAKLLRFEIDGFQGYTRNFTIYDATDQQTL
VKDCLKELNLDDKQFPPRSVLGTISGAKNALMDSQAFARRAGDFYEQKVADVYDLYEKKL
KANNALDFDDLLLLAVRLLQENEEVREKYQDRFQYILVDEYQDTNHAQYMLTHILAAKWK
NICVVGDADQSIYAWRGADIRNIMDFNRDYPQAASIKLEQNYRSTKTILKAANAVIDNNM
DRPQKNLWTENPEGHKIIHYHAQTEHDEADYVAGVIYNRHTIENEPYGDMAILFRTNSQS
RVLEEKLMRYSIPYTMVGGTKFYDRKEIKDIIAYLRLLYNPEDSLSLMRIINVPKRNLGA
TTLEHLAEYAEKKGISLFEALSSTEEIPVTKRAKASLEQFSIMIFDLLGHVDEWDVQTLM
EEVIRQTGYGDMLDKEAAHDPQGESRKDNVGEFLSVAKDYVDSNPEGSLQDFLENVALVS
DVDEFESSDSKVTLMTLHAAKGLEFPVVFLVGMDEGLFPHSRTLMDESQIEEERRLAYVG
ITRAERQLYVTNASTRTMYGRISAYLPSRFLDEIPESLVEEYHRRTAMPQNHAGDVPARQ
RVSILTKPVTTSLPKKHAVDHTWQKGDTVRHKIWGTGKVLEVIGSGENLQLKLEFPTKGV
RQVMAKFAPIEKV
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctatttttgctactcttaacgaacgccagttcgaagctgtccagcatacagaa
gggccgctgctcatcacggccggtgccggctcgggtaaaacaaaggtactgacctgccgg
attgcccatttactggagctaggcattgcgccatatcgcatcctggccatcacctttacc
aataaagctgccagggaaatgcgggaacgtgtagaaaatcttgtcggtgccgaagcagaa
cgcatctggctcagtacgttccattccttttgtgccaaactgctgcgttttgaaatcgac
ggatttcaagggtatacccggaatttcacgatttacgatgcgacggaccagcagacactc
gtcaaggactgcctgaaagaactgaatctggacgataagcaatttccacctcgatccgtt
ctgggaactatctccggagccaagaatgcgctcatggattcccaggcgttcgcccgccgg
gccggtgatttctatgaacaaaaagtagccgatgtctacgacctgtatgaaaagaaactg
aaagccaataatgccctcgacttcgacgatttgctgctcctggctgtgcgcctgctgcag
gaaaacgaagaggtccgggaaaaatatcaggaccggttccagtatattctcgtcgatgaa
tatcaggatacgaaccatgcccagtacatgctgacccacatcctggcggccaaatggaag
aacatctgcgtcgtcggcgatgccgatcagagcatctacgcctggcgtggtgccgatatc
cgcaatatcatggatttcaaccgcgactaccctcaggctgcgtccatcaagctggagcag
aattaccgttctaccaaaacaatcctcaaagcagccaatgccgtcatcgacaacaatatg
gaccggccgcagaagaatctgtggacggaaaatccggaaggccataaaatcatacattat
cacgcccagacggaacacgatgaagccgattatgtagcgggtgtcatctataaccgtcat
accattgaaaatgagccgtacggtgatatggccatcctgttccgcaccaattcccagtcc
cgtgtgctggaagaaaaactgatgcgctattcgattccctataccatggtaggcggtacg
aaattctatgaccgcaaagaaatcaaggatattatcgcctatctgcgccttttgtataat
ccggaagacagcctgagcctgatgcgcatcatcaatgtaccgaagcgcaacctcggcgct
actacgctggaacatctggcagaatatgccgaaaagaagggcatttccttatttgaagcc
ctttcgtctacggaagaaatccccgtcaccaaacgggccaaggcctcactggaacagttt
tccattatgattttcgatttgctgggccatgtcgatgaatgggatgtccagactctgatg
gaagaagtcatccgccagaccggatatggcgatatgctcgataaagaagctgcccatgat
ccgcagggggaaagccgtaaggataatgtcggcgaatttctttccgttgccaaagattat
gtcgattccaatccggaagggagtctgcaggattttctggaaaatgtcgctttggtcagc
gatgtcgatgaatttgaaagcagcgattccaaggttacgctcatgacgcttcacgccgcg
aaaggcctggaattccctgtcgtatttctggtcggcatggatgaaggattgttccctcac
agccggactctcatggacgaatcccaaatagaagaagaacggcgcctggcctatgtcggc
attacccgggcggaacgccagctgtatgtgaccaatgcttcgacgcgcaccatgtacggc
cgtatttccgcctatcttcccagccgcttcctcgacgaaatcccggaatcgctggttgaa
gagtaccaccgccgcacggccatgccccagaatcacgccggggacgtgccagcacggcaa
cgcgtgtctatcctgaccaagccggtcacgacgagtctgcccaaaaagcacgctgtcgat
cacacctggcagaaaggggatacggtacgtcataaaatatggggaaccggcaaggtcctg
gaagtcataggcagtggtgaaaatctgcagttgaaattggaatttcccactaagggtgtg
cgccaggtcatggcaaaatttgcacccatagaaaaagtgtag
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