Mannheimia haemolytica M42548: MHH_c18340
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Entry
MHH_c18340 CDS
T02635
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mhx
Mannheimia haemolytica M42548
Pathway
mhx03410
Base excision repair
mhx03430
Mismatch repair
mhx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mhx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MHH_c18340 (recJ)
03430 Mismatch repair
MHH_c18340 (recJ)
03440 Homologous recombination
MHH_c18340 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhx03400
]
MHH_c18340 (recJ)
DNA repair and recombination proteins [BR:
mhx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MHH_c18340 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MHH_c18340 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MHH_c18340 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
AGK02282
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Position
1720605..1722326
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AA seq
573 aa
AA seq
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MEKIIKRRPLLTTEIVSTNPLLNRIYQSRGIKNTQELEHNLKNLHRPQQLANIEQAVDLL
LQAFREKSRIIIVGDFDADGATSTSLALIALRQLGFDKVDYLIPDRFSQGYGLSVAVAEM
VLAKGADLVLTVDNGISSTEGIALLKSHQIQVLVTDHHLPPESLPNADALVNPNLAFCEF
PSKSLAGVGVIFYVMMALRSRMREQHLFENKPEPNFAELLDLVALGTVADVVPLDQNNRI
LVHQGLQRIRSGHCRLGIKALAEVGKRDLSTLQAADLGFAIAPRLNAAGRLENMSLGVEL
LICENMELARRLALDLDSLNQTRKEFEQEMKAEALSICANLPSLAQSEQAHGIVLYQADW
HQGVIGILASRIKDQFNRPVIAFAQESEESEYLKGSARSINGVHMRDLLEHIDMRHPDLI
EKFGGHAMAAGLTIHQSKLDLFKQIFDQSINAIIEPEQLQGIIYTDGELNALEFTLANAE
MIRQGGPWGQHFPEPSFEGEFSILQQKLLAGKHLKLMLQSEKGQLFDAIWFNVDVRAFPD
LSIKKARLVYRLDINEFRGEKSLQLKVEYLKYI
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaaaataattaaaaggcgcccattattaacaacggaaatagtctctacaaacccg
ttattaaatcgaatctatcaaagtcgaggcataaagaatacgcaagaactagagcataat
ttaaagaatttgcatagaccacagcaacttgccaatattgagcaagccgttgacttgcta
ttacaagcctttcgtgaaaaaagccggatcattattgtgggtgattttgatgcagatggt
gcaaccagtacatcgcttgcccttattgcgttacgccaattgggtttcgataaggtagat
tatttaattccggatcgtttttctcaggggtacggattgagtgtagcggttgctgaaatg
gtattagcaaaaggggcggatttagtcttaacggtagataatggaatttcttcgactgaa
ggcattgctctgctaaaaagccatcagattcaagttttggttaccgatcatcatttaccg
ccagagagcctacccaatgcagatgcactggtaaaccccaatttagctttttgtgaattt
ccgtctaaatctttagccggggtaggcgtgatcttctatgtaatgatggcattgcgttct
cgtatgagagaacaacatttatttgaaaataaaccagagccaaattttgctgaattactg
gatttagtcgctttaggcacagtggctgatgtagtgccgttagatcaaaataatcggata
ttggtgcatcaagggttacagcgaatccgttcagggcattgccgtttagggataaaagct
ttagcggaggtgggcaagcgagatctttctactttgcaagcagcagatttgggttttgct
atcgcaccacgtttgaatgcagctggtcggttagaaaatatgtctttaggggttgagtta
ctaatttgtgaaaatatggaattagctcgccggcttgcgcttgatcttgattctcttaat
caaacccgaaaagagtttgaacaagaaatgaaagcagaagcactgtcgatttgtgcgaat
ttgccaagtcttgcgcagtctgaacaggcacacggaatagtgttatatcaagcagattgg
caccaaggtgtaattgggatcttagcttctcgcattaaagatcaatttaaccgtcctgtc
attgcttttgcacaagaaagtgaggaaagtgaatatctaaaaggttctgctcgctcgatc
aacggagtacatatgcgagatttactggaacatatcgatatgcgacatccagacttgatt
gaaaaatttggtggacacgcaatggcggctggtttgactatccatcaatcaaaattagat
ttatttaaacagatatttgaccaatctattaatgcaattatcgagcctgagcaattacaa
ggcatcatttataccgatggtgagttaaatgcactagagtttactttagccaatgccgag
atgattaggcaaggtgggccttggggacaacattttccagaacctagttttgaaggggag
tttagcattctccaacaaaaattactcgcaggtaaacatttaaaattaatgttgcaatca
gagaaagggcaactatttgatgcaatttggtttaatgtggatgtaagggcgtttcctgac
ttatcgatcaaaaaggcaagattagtttataggttggatattaatgaatttcgaggagag
aaatctttgcaattaaaagtggagtatcttaaatatatttga
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