Mannheimia haemolytica M42548: MHH_c19640
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Entry
MHH_c19640 CDS
T02635
Symbol
deaD
Name
(GenBank) DEAD-box RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mhx
Mannheimia haemolytica M42548
Pathway
mhx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mhx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MHH_c19640 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mhx03019
]
MHH_c19640 (deaD)
03009 Ribosome biogenesis [BR:
mhx03009
]
MHH_c19640 (deaD)
Enzymes [BR:
mhx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MHH_c19640 (deaD)
Messenger RNA biogenesis [BR:
mhx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MHH_c19640 (deaD)
Ribosome biogenesis [BR:
mhx03009
]
Prokaryotic type
rRNA helicases
MHH_c19640 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
DRTGG
Motif
Other DBs
NCBI-ProteinID:
AGK02410
LinkDB
All DBs
Position
complement(1834547..1836355)
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AA seq
602 aa
AA seq
DB search
MTTESLTFADLGLPQPILDAVNEMGFVNPSPIQQECIPHLLAGRDVLGMAQTGSGKTAAF
SLPLLAQIDPTQRHPQMLVMAPTRELAIQVADACEQFAKNMKGIRVVTVYGGQRYDIQLR
ALKQGSQVVVGTPGRILDHIRRGTLDLSELKFIVLDEADEMLRMGFIDDVETVMAELPET
HQTALFSATMPEPIRRITRRFMKDPQEVKIKATERSAPDIEQSYWLVNGFRKNDALLRFL
EVEEFDAAIIFTRTKTGTIDITELCERNGYRTAALNGDMTQQAREQTLDKLRSGRLDILV
ATDVAARGIDIERISLVINYDIPLEEESYVHRIGRTGRAGRSGRALLFVEPRERRLLRNI
ENLIKKPINEVAIPNHEILMEKRREKFKARISKQLEHHDLEKYRELLEDLFTADQDHEEL
AAAMMMLLQEKQKLILPPDPVVRAARSERGRDRNERNDRRNGREHRENNGVAMDLYRIEL
GREDGVEVRHIVGAIANEGDISSRYIGHIKLYDKYSTIELPQGMPNHLVQHFAHKARVLS
KPMQMTLLGSANSASNANPFEGRGRRGNDRNDRGGRRDGGFNKDRKGGFKEKRFSEKRGR
RD
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgacaactgaatctttaactttcgccgatttaggcttacctcaaccaatccttgatgct
gtaaatgaaatgggctttgtaaacccatcacccattcaacaagaatgtattcctcattta
ttagccggtcgtgatgtgcttggtatggcacaaaccgggagcggtaaaaccgccgcattc
tcgctgccgctgttggcacaaattgacccaacacaacgccacccgcaaatgttggtgatg
gcacccacccgtgagcttgcgattcaagtagccgatgcttgtgagcagtttgcaaaaaat
atgaaaggcattcgtgtagtgacggtttatggtggacaacgttacgacattcaattacgt
gctttaaaacaaggctcacaagtagtagtgggtacacctgggcgtattcttgaccatatc
cgccgtggcacattagatttatccgaattaaaattcatcgtgttagatgaagccgatgaa
atgctgcgtatgggctttattgacgatgttgaaacggtaatggctgaattaccggaaaca
catcaaactgctctcttctctgccaccatgccggagccgattcgccgtattacccgtcgt
tttatgaaagatccgcaagaggtaaaaattaaggcaaccgagcgttcagccccggatatt
gaacaaagctactggctggtaaacggcttccgtaaaaacgatgcgttattgcgtttccta
gaagtagaagaatttgatgctgctatcatctttacccgcaccaaaaccggtactattgat
attaccgaattgtgtgaacgcaacggctaccgtactgcggcattaaacggcgatatgacc
cagcaagcccgtgagcaaaccttagataaattacgctccggtcgtttagatattttagtc
gccaccgatgttgctgcccgtggtattgatattgagcgaatcagcttggttattaactac
gatattccgttagaagaagaatcttatgttcaccgcatcggacgtaccggtcgtgccggt
cgttcaggtcgtgccttactgtttgttgagcctcgtgaacgccgcttattacgcaatatc
gaaaatttaatcaaaaaaccaattaatgaagtggcgattccaaaccacgaaattttaatg
gaaaaacgccgtgagaaattcaaagcccgcatttctaagcagttagaacatcacgattta
gaaaaatatcgtgaattgttggaagatttatttactgcggatcaagaccacgaagaatta
gcagcggcgatgatgatgttactgcaagaaaaacaaaaactgattctgccaccggatccg
gttgtgcgtgctgcccgttctgaacgtggacgtgaccgcaatgagcgaaacgatcgtcgt
aacggtcgtgaacaccgtgaaaacaatggtgtggcaatggatttataccgcattgaattg
gggcgtgaagacggtgtggaagttcgtcatattgttggagcgattgccaacgagggggat
atcagcagccgttacatcgggcatatcaaactttatgataaatactcaaccattgagttg
ccgcaaggaatgccaaatcatctcgtacaacatttcgctcacaaagcacgtgtattaagc
aaaccaatgcagatgacattacttggctctgcaaacagtgcaagtaatgcaaatccattt
gaaggtcgtggtcgccgtggtaacgatcgtaatgatcgtggtggtcgccgagacgggggt
ttcaataaagaccgcaaaggtggctttaaagaaaaacgtttcagtgaaaaacgtggtcgt
cgtgactaa
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