Mannheimia haemolytica M42548: MHH_c20830
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Entry
MHH_c20830 CDS
T02635
Symbol
topA
Name
(GenBank) DNA topoisomerase 1 TopA
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mhx
Mannheimia haemolytica M42548
Brite
KEGG Orthology (KO) [BR:
mhx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mhx03032
]
MHH_c20830 (topA)
03400 DNA repair and recombination proteins [BR:
mhx03400
]
MHH_c20830 (topA)
Enzymes [BR:
mhx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MHH_c20830 (topA)
DNA replication proteins [BR:
mhx03032
]
Prokaryotic type
DNA Topoisomerases
MHH_c20830 (topA)
DNA repair and recombination proteins [BR:
mhx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MHH_c20830 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_IS1595
Toprim_4
DUF7351
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
AGK02529
LinkDB
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Position
complement(1968786..1971392)
Genome browser
AA seq
868 aa
AA seq
DB search
MGKSLVIVESPAKAKKINQYLGSNYVVKSSVGHIRDLPKSGSDEKTEKAKPISTKGLTAA
EKAKIKAEKERVALVKRMGIDPYNGWKANYQILPDKEKVVSELKSLAKKADHIYLATDLD
REGEAIAWHLREIIGGDDSRFSRVVFNEITKDAIKKAFDDPQPLNIDRVNSQQTRRFLDR
VVGFMVSPLLWKKVARGLSAGRVQSVAVKLLVEREREIKAFQSEEFWTILANTQINRKKL
PLELTTYKGKKFSASNEAEANVAVRALEQSDFIVSNIEAKETSSRAAAPFITSSLQRAAS
TRLGFGVKKTMMLAQRLYEAGYITYMRTDSTNLSREALAMARGYIQDNFGANYLPEKANV
YRSKDNAQEAHEAIRPSDVNVKMADLKGMDKDAERLYDLIWRRFLACQMLPARYDSTAVT
VSAGDYELKANGRVLRFDGWTKVLPVQGKNPEDQELPAVELHQKLTLDEIVPSQHFTKPP
ARFNEASLVAELEERKIGRPSTYASIISTIQERGYVRTENKRFYVEKIGEVVTDRLNESF
KDLMNYDFTANMEEVLDQIAEGSKNWKEELNTFFKHFSEELSQAELDELEGGMKPNSLVP
TDIDCPTCGRKMAIRTASTGVFLGCTGYALPPKERCKTTMNLIPEAEFFNVLDSDSETKA
LMARKRCPKCDSAMDSYVIDAERKLHVCGNNPNCDGHIIEQGSFKIKGYDGPVVECDKCG
SDMHLKLGRFGKYMGCTSCDNTRKILKNGEVAPPKEDPIAFPELKCEKADAYFVLRDGAS
GVFMSAHNFPKVRESRAPKVVELAQYRERLPEKLQYLADAPQQDPEGNEAIIRFSRKEKR
QYVTSEKNGKATKWIVDYLDGKWVERKK
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaatcactagttattgtggagtctccggctaaggcaaaaaaaattaaccaatat
cttggtagtaattatgtggtgaaatcgagtgtggggcatattcgtgatttaccgaaaagt
ggtagtgatgaaaaaacggaaaaagcgaaaccgatttcaaccaaagggctgaccgctgcc
gaaaaagctaaaatcaaagcagaaaaagagcgtgttgcattggttaaacgtatgggtatc
gacccctataatggctggaaagctaactatcagattttgccggataaagagaaagtggtt
tccgagctaaaatcgttggcaaagaaagcagatcatatctatctggcaaccgacttggat
agagaaggggaggcgattgcgtggcatttgcgtgaaatcattggtggtgatgacagccgt
tttagccgagtggtatttaatgaaatcaccaaagatgcgatcaaaaaggcttttgacgat
ccgcaaccgctcaatattgaccgtgtaaattcccagcaaacccgccgctttttagaccgt
gtagtgggctttatggtgtcgccattattatggaaaaaagtagctcgtggtttatcggca
gggcgtgtgcaatcggttgccgtaaaattactggttgagcgtgagcgtgaaatcaaggcg
ttccaaagcgaggagttttggactattcttgccaatacgcaaattaatcgtaaaaaatta
ccgcttgaattaactacttataaaggtaaaaaattctcggcaagcaatgaggctgaagca
aatgttgcagtgcgtgctttggagcagagcgattttattgtttctaatattgaagccaaa
gaaaccagctctcgagctgctgcaccatttattacctcatcgttacaacgtgccgctagc
actcgtttaggttttggggttaaaaagacgatgatgttagcccaacggttatatgaagcg
ggttacatcacctatatgcgtactgattcaaccaaccttagccgtgaagcattagcaatg
gctcgaggttatattcaggataatttcggggcgaattatttgccggaaaaagcaaatgtg
tatcgcagtaaagataatgcccaagaagctcacgaagccattcgcccgtcggatgtgaat
gtcaaaatggcggatttaaaaggaatggataaagatgccgagcgtttatacgatttaatt
tggcgtcgtttcttggcgtgtcaaatgttgcctgctcgttatgattctaccgcagtcaca
gtgtctgccggagactatgaactcaaagcaaacgggcgtgtactgcgttttgacggctgg
acgaaagtactgccggtgcaaggcaaaaatccggaagatcaggaattaccggcggttgaa
ctgcatcaaaaattaacgcttgatgaaattgtgccaagtcagcattttactaaaccgcct
gcacgttttaatgaggcgtctttggttgctgagttagaagagcgaaaaattggccgccct
tcaacctatgcttcaattatttcgacgattcaagaacgtggctatgttcgcaccgaaaac
aagcgtttttatgtggaaaaaatcggtgaagtagtgacggatcgcctcaacgaatcattc
aaagatttaatgaattatgatttcactgccaatatggaagaggtgctcgaccaaattgca
gaggggtctaaaaattggaaagaagagttgaatactttctttaaacatttctctgaagag
ttgagccaagcagaattagatgaacttgaaggcggaatgaaaccaaacagccttgtgcca
accgatattgattgcccgacttgtggacgaaaaatggcaattcgcaccgcttccacaggg
gtatttttaggttgcaccggctatgctttaccgccaaaagagcgttgcaaaacgacaatg
aatttaattccagaggcggaatttttcaatgtgttagattcggattctgaaaccaaagcc
ctaatggctcgcaagcgttgcccgaaatgcgattcggcaatggatagttatgtgattgat
gctgaacgtaaattacacgtttgtggtaataatccaaattgtgatggtcatattattgag
caaggttccttcaaaattaaaggctatgacggacctgtagtggaatgcgataaatgcggt
tcagatatgcacttaaaactgggtcgtttcggcaaatatatgggctgcacaagctgcgat
aacacccgtaaaattctgaaaaacggggaagttgctccgccaaaagaagatcctattgct
tttcctgaattaaaatgtgaaaaagccgatgcctattttgtattaagagacggagcaagt
ggggtgtttatgtcagctcataacttcccgaaagtgcgtgaaagccgtgcaccaaaagtg
gtagagttagctcaatatcgtgaacgtttgccggagaaattgcagtatcttgccgatgct
ccgcagcaagatccggaaggaaacgaggcaattatccgttttagtcgtaaagagaaacgc
caatatgtgacttctgagaaaaacggcaaagccaccaaatggattgttgattatctagac
ggtaaatgggttgagcgtaagaaataa
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