Mannheimia haemolytica M42548: MHH_c26910
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Entry
MHH_c26910 CDS
T02635
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V, alpha subunit RecD
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mhx
Mannheimia haemolytica M42548
Pathway
mhx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mhx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MHH_c26910 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhx03400
]
MHH_c26910 (recD)
Enzymes [BR:
mhx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MHH_c26910 (recD)
DNA repair and recombination proteins [BR:
mhx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MHH_c26910 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
Viral_helicase1
UvrD_C_2
AAA_11
UvrD-helicase
Helicase_RecD
SLFN-g3_helicase
DUF2489
AAA_22
DEAD
ResIII
UvrD_C
nSTAND3
PhoH
Imm71
TrwB_AAD_bind
SH3_13
FtsK_SpoIIIE
AAA_16
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AGK03119
LinkDB
All DBs
Position
complement(2529076..2531037)
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AA seq
653 aa
AA seq
DB search
MLNLLLELKQEKAISDLNYQFARFIDNKQKPYGYSPLEQDLAVLAAALVSYQVGLGHTAL
RLENLSLSSLFELNSKPQTYHLLEQILQKIEQIPPLEWQSVLKNHIAFSYSPETIKPMLF
QNSLLYFYRYWQAEHRIAGYLQQAVDFSEKFANTELNQSILNQLFTGKAQTIDWQKIAVA
TALEKQFSLISGGPGTGKTTTVVKLLLGLQLKQQALQKPYLQIALAAPTGKAAARMKESL
ESKLAEEKGLSEELKRSIPTEAVTIHRLLGARPLTEKTKYHTKNPWHYDLVVLDEASMID
LSMMEKVVQALKPNSRLIMLGDKDQLASVEAGSIMGELGSFIDNGYSQSHCDYLKAVTDY
QIEAGNALPIGDCLSHLKHSYRFGEKAWIGELANAVNDQKINLSWEIFDKYKNSDKLENF
CYPETKETTDKSSWIEKSVQMVVDKAVELYRDYLQAVQKREKNPDSVSVKAIFEKFQKVR
ILSALRVSELGVERLNMAIAEGLRKASLVKFNHSRDRYIGKPILMTENMPINSIASGDVG
IILPDENGESRVYFDSLQENREHHSLPLGRVSNYEAAYIMTVHKSQGSEFEHTVLVLPHS
ISPVLTKELIYTAITRAKDKFTLFGSEKVWKYSVGAKTERQSGLKEQIRGKFS
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgctgaatttattattggaacttaaacaagaaaaggcgatttctgacttaaattatcaa
tttgcccgttttattgataataagcagaaaccctatgggtattcgcctttggagcaagat
ttagctgtgttagccgctgcgttggtttcttaccaagtgggacttgggcatacggcatta
cgtttggaaaatctcagtctttcttctctttttgaattaaatagcaagccacaaacttat
catttgctcgaacaaattttgcaaaaaattgagcaaattccaccgcttgaatggcagagt
gtgctgaaaaatcatatcgcttttagctattctcccgaaacaattaaaccgatgttattc
caaaacagcttgctctatttttatcgctactggcaagcggagcatcgcattgccggttat
ttacaacaagcggttgatttttcggaaaaatttgcaaataccgaattaaaccaaagcatt
ctcaaccaactattcactgggaaagctcaaactatcgactggcaaaagattgccgttgca
acagcattagaaaagcagtttagcttaatttcaggtgggccgggaaccggaaaaacaact
acggtagtaaaattattactcgggctgcaattaaaacagcaagcactacagaaaccatat
ttgcaaatcgctctggctgcaccaaccggaaaagcagcagcaagaatgaaagagtcgctg
gaaagcaagttggcggaagaaaaggggttatctgaggagttaaaacgctctattccaact
gaagcagtgactattcatcgcttgcttggtgcgagaccattaactgagaaaaccaaatat
cataccaaaaatccgtggcactatgatttggtcgtattagatgaggcttcaatgattgat
ttatcaatgatggagaaagttgttcaagcgctcaaaccaaactctcgcttgataatgctg
ggagataaagatcagcttgcttctgtggaagctggttcaattatgggggaacttggctct
tttattgataatggttatagccaatcccattgcgattacttaaaagccgttaccgactac
caaattgaagccggtaatgcgttgccgattggtgattgtttatctcacttaaaacatagc
tatcgatttggcgaaaaagcctggattggagagcttgcaaatgcagtaaatgatcaaaaa
attaacctttcgtgggagattttcgacaaatataaaaacagtgataagttagaaaatttc
tgttatccggaaacgaaagagacaacggataaatcaagctggattgaaaaaagtgtgcaa
atggtggtggataaagcggttgaactttatcgtgattatttacaagcggttcaaaaacgg
gagaaaaatccagattcagtgagtgtgaaagcgatttttgagaaatttcaaaaagtccga
attttatcagccttaagggtaagtgaactgggggttgaacgtcttaatatggcgattgcg
gaaggcttgcggaaagctagcttagtgaaatttaatcatagccgagaccgctatatcgga
aaaccgattttaatgacagaaaatatgccgataaatagcatagccagcggtgatgtcggc
atcattttgccggacgaaaatggagaaagccgagtttattttgattccttacaggaaaat
agagaacaccatagtttgcctctaggtagggtttcaaattatgaagcagcttatattatg
actgtgcataaatcgcaaggttctgaatttgaacatacggtattggtgttgccccattcg
atttccccggtgctgacgaaagagttgatttacaccgcaatcacaagggcaaaagataaa
tttaccttatttggtagcgaaaaagtttggaaatacagtgttggtgccaaaaccgaaaga
caaagtgggctaaaagaacaaataagaggcaagtttagctaa
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