Mesomycoplasma hyopneumoniae 232: mhp063
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Entry
mhp063 CDS
T00206
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
mhy
Mesomycoplasma hyopneumoniae 232
Brite
KEGG Orthology (KO) [BR:
mhy00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
mhp063 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhy03021
]
mhp063 (rpoD)
Transcription machinery [BR:
mhy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
mhp063 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
AAV27387
UniProt:
Q601Y8
LinkDB
All DBs
Position
74166..76196
Genome browser
AA seq
676 aa
AA seq
DB search
MLKKQLKFPKQESFIDFSLLEKTQKTKKIIDKKVSSISVEEIKMENSLKKVNIEEGKKTD
LTREDGIKKSKNTKKANLRERRKNSYEQIENFFSIIKTSKHQSDFLKNLEQFRAKTLLQL
SQNINSTSLAQKSKKEEKSKQKTEKQLNSTLVSPKKPVKKAKTNSVKKKLTKIIPVKEPD
NIDLPKKMTENKELFPQKEDFIPISNINQNSSEYEFIIEKLEQKLEQKHQKIGKNSSNLD
NFSIFLSHDEIYKYIEKWNLAIEEEKLDDFFQTLIQRKIIADEVDKEDLENVSSFDFAEQ
INNKKSVRDKKNKKYSQDFDQSLINLDDQNFDINHNEEDDNSELNLGQSVDDSLKIQEID
DLDYITENSPNQYHKPKVYSDEVYLNKLTDTSDMIKWYMRWIGKYGKLLTAEEERELAKK
MKIKGRIGKKARDTLIKRNLRLVVNSAKRYKNRGLGFIDLISEGNLGIIKAVAKYDYTRG
FKFSTYATWWIRQAITRAVADQARLIRIPVHMVETINKINKVERELQQEKGLNPTAEEIS
ERLGGEFSPDKIRYIKKINIDPISLDKAIGKEEDSSFSDFIKDENMISPVDYAIREEKAK
VLLEMIDSTLDYDERDFIKRRYGVGTNDEGIPYQAHSFEELAAMRRVTKERVRQIEAKIL
KKLRTPHRRLSLRDFN
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaaaaacagttaaaattcccaaaacaagagagttttattgatttttcgttgcta
gaaaaaacgcagaaaacaaaaaaaattattgataaaaaagtttcaagtattagtgtagaa
gagataaaaatggaaaattcattaaaaaaagtaaatatagaagaaggaaaaaaaacagat
ttaacaagagaagatggaattaaaaagtcaaaaaatacaaaaaaagcaaatcttcgtgag
cgaagaaaaaattcatacgagcaaatcgaaaattttttcagcattatcaaaacatcaaaa
catcaatcagattttttaaagaatttagaacaatttcgagcaaaaactttattgcaacta
tctcaaaatattaattcaactagtttggctcaaaaatcaaaaaaagaagaaaaatctaaa
caaaaaacagaaaaacagctaaattccaccctggtatcccccaaaaaacccgtaaaaaaa
gctaaaacaaattcagttaagaaaaaactaactaaaattatcccagttaaagaacctgat
aatatagatttacctaaaaaaatgacagaaaataaagaacttttcccccaaaaagaggat
tttattccaatttctaatattaatcaaaatagttctgaatatgagtttattatcgagaaa
ttagaacaaaaattagaacaaaaacaccaaaagataggaaaaaatagttctaatttagat
aatttttctatttttttaagtcacgatgaaatttataaatatattgaaaagtgaaatctt
gcaattgaagaagaaaaacttgatgatttttttcaaactttaatacaaagaaaaataatt
gctgatgaagtcgataaagaggatcttgaaaatgtttcaagttttgattttgccgagcaa
attaataataaaaaatctgttagagataaaaaaaataaaaaatatagtcaagattttgat
cagtcactaataaacttagatgatcaaaatttcgatattaatcataacgaggaagatgat
aattctgagctaaatctaggacaatcagtcgatgattccttaaaaattcaggaaattgac
gacctggattatataacagaaaatagtccaaatcaataccacaaaccaaaagtttatagt
gatgaagtttaccttaacaaactgaccgatacaagtgatatgataaaatggtatatgcgt
tggatcggaaaatatggaaaacttttaacggctgaagaagaaagagaacttgcaaaaaaa
atgaaaatcaaaggccggattggaaaaaaagcgcgtgataccttaataaaacggaattta
cgtttggtggttaacagtgcaaaacgctataaaaaccgcggtcttggatttatcgatcta
atctcagagggaaacctcggtattattaaagcagttgcaaaatatgactatacccgtgga
tttaaattctcaacttatgcaacctgatgaatccgccaagcgattacaagggcggttgcc
gaccaagcccggctcattcgaattccggttcatatggtcgagacaatcaataaaattaat
aaggtagaaagggaattgcaacaagaaaaaggacttaatccaacagccgaagaaatttca
gaacgtttaggtggcgaatttagccctgataaaatacggtatattaaaaaaatcaatatt
gatccaatttcactagataaagcaattgggaaagaggaagatagttctttttctgatttt
atcaaggatgagaatatgatttccccagtagattatgcaattcgtgaggaaaaagcgaaa
gttttgttggaaatgatcgattcaacacttgattatgatgaaagagattttatcaaaaga
cgttatggggtcggaacaaacgatgaaggaattccttatcaggcacatagttttgaagag
cttgcggcgatgcgtcgagtaacaaaagagagggttaggcaaattgaggcaaaaattcta
aaaaaattaagaaccccacatcgccgcctatcattaagggattttaattaa
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