Microbulbifer hydrolyticus: GTQ55_02675
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Entry
GTQ55_02675 CDS
T06404
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mhyd
Microbulbifer hydrolyticus
Pathway
mhyd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mhyd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GTQ55_02675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mhyd03019
]
GTQ55_02675
Enzymes [BR:
mhyd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GTQ55_02675
Messenger RNA biogenesis [BR:
mhyd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GTQ55_02675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_25
AAA_30
Flavi_DEAD
HEM4
Motif
Other DBs
NCBI-ProteinID:
QHQ38011
LinkDB
All DBs
Position
complement(640878..642161)
Genome browser
AA seq
427 aa
AA seq
DB search
MTFHKLGLSDPILQAIEEKGYTTPTEIQRKAIPAILEGRDIIATAQTGTGKTAAFVLPML
AALSGDRKRRAKRFRALILVPTRELAMQVEDNIRQYGKHLSVASMAMVGGVDLEPQKQQL
IDGVDIVVATPGRLLDLAHQRALYFDELQILVMDEADRMLDMGFIDDLNKIIERLPAQRQ
NLLFSATLSSQVAALAKTVVENPFEVSVAGNQKTAPKITQWLIAVDKHNKSALLSHLVKE
HNWTQALIFIRTQHGAAKLVSQLEKRGIKAESIHGGKSQASRSKILADFKSGAISLLVAT
GVAARGIDIDELPRVVNYDMPDDADEYIHRIGRTGRAGSSGEAVSLVSKDDFKRLCAVER
RLGKIIDRVQIEAFPVVKDLPPSNLNFSTKGEKNSRGRNRTGKDDNTAKNAQPKPAAPKL
TPWGKLK
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgacattccacaaacttggcttgagcgacccgatcctgcaggccattgaagagaagggc
tataccacccctaccgagatccagcgcaaggcaattcccgccatactggaagggcgggat
atcattgcgacagcccagaccggtaccggcaagactgcagcctttgtgttacccatgctc
gcggccctgagcggagatcgcaagcgacgggcgaagcgcttccgcgcactgatccttgtg
ccgacccgcgagctggccatgcaggtggaagacaatatccggcagtatggaaagcacctg
tcggttgcctctatggcaatggtgggtggggttgaccttgagccacaaaagcaacagctg
atcgacggcgtggatattgtggttgccacgcccggccgactgctcgatcttgctcaccag
cgcgccctctactttgacgagctacagatcctggtgatggatgaggccgatcgtatgctg
gatatgggctttatcgatgacctcaacaagatcattgagcggctgccggcacaacgccag
aaccttctgttttcggccaccctatcgagccaggtcgccgcgctggcgaaaactgtggtg
gaaaacccgtttgaggtttcggtggcgggcaaccagaagacggcaccgaagattacccag
tggctcatcgccgtcgacaagcacaacaagtccgccctgctcagccatctggtgaaagag
cacaactggactcaggcactgatcttcatccgtacgcaacacggtgcggccaagctggtg
agccagttggaaaagcgtgggatcaaggcggaatccattcacggcggcaaaagccaggcg
tcgcgctccaagatacttgcagacttcaaatccggtgcaatcagcctgcttgtggctacc
ggtgtagcagcgcgcggcattgatatcgacgagctgccgcgggtggtcaactatgacatg
ccggacgacgccgacgagtatattcatcgcattggccgcaccggccgcgccggatcatcc
ggcgaggcggtttcactggtctccaaggacgatttcaaacgcctgtgtgcagtcgagcgc
cgcctgggtaagataatcgaccgagtccagattgaagcgtttccagtggtcaaggatttg
ccgccatccaacttgaacttttccaccaagggcgaaaaaaacagtcgaggtcgtaacagg
acaggaaaggacgataacactgcgaaaaacgcacagcctaagccagcggcccccaaactc
acgccctggggcaagctcaagtag
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