Microbulbifer hydrolyticus: GTQ55_07550
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Entry
GTQ55_07550 CDS
T06404
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
mhyd
Microbulbifer hydrolyticus
Brite
KEGG Orthology (KO) [BR:
mhyd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mhyd03016
]
GTQ55_07550 (thpR)
Enzymes [BR:
mhyd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
GTQ55_07550 (thpR)
Transfer RNA biogenesis [BR:
mhyd03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
GTQ55_07550 (thpR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
QHQ38850
UniProt:
A0A6P1TB94
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All DBs
Position
complement(1791114..1791677)
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AA seq
187 aa
AA seq
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MDTDADLEPVRLFIGIAPNAATQRFLDATCAYLEGLRLPRDCRWISETNRHLTLAFLGDT
ERRHLGSIEERLREIARQSPTCPGQIVSTHPFPRDRAKMLAAELLPTPALTALHEKCRKL
MAAIGKQPERKTFRPHFTLARSRTGFSRMPAAPADFICRLDNITLYHSLLATGGSQYQPL
LSLPLAG
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
gtggatacagacgctgatctggagccagtgcggctttttatcggcatcgctcccaatgcc
gcgacccagcggtttctcgatgccacttgcgcttacctggaggggcttcgcctgcctcgg
gactgccgctggatcagcgaaaccaaccgccaccttacgctggcatttctgggagataca
gagcgtcgccacctgggctccatcgaagaaagactgcgagaaatcgcccggcaatcgccc
acctgcccgggccagatcgtcagcacacaccccttccccagggacagagccaaaatgctg
gcggcggaacttctgccaacccccgcgcttacagccctgcatgaaaagtgccgtaaactg
atggcggctattggcaagcaaccagagcgcaaaacgtttcgcccgcatttcactctggcc
agaagccgtacgggcttttcaaggatgcccgccgctcccgccgacttcatctgtcgactg
gacaatatcaccctgtatcacagccttctcgcgacgggaggcagtcaataccaaccgcta
ctttcactccccctcgcaggatga
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