Microbulbifer hydrolyticus: GTQ55_08155
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Entry
GTQ55_08155 CDS
T06404
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mhyd
Microbulbifer hydrolyticus
Brite
KEGG Orthology (KO) [BR:
mhyd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mhyd03032
]
GTQ55_08155 (topA)
03400 DNA repair and recombination proteins [BR:
mhyd03400
]
GTQ55_08155 (topA)
Enzymes [BR:
mhyd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GTQ55_08155 (topA)
DNA replication proteins [BR:
mhyd03032
]
Prokaryotic type
DNA Topoisomerases
GTQ55_08155 (topA)
DNA repair and recombination proteins [BR:
mhyd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GTQ55_08155 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QHQ38958
LinkDB
All DBs
Position
1934968..1937703
Genome browser
AA seq
911 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGKDFVVKSSIGHIRDLPTGASNKKPVDAKERARRAAETR
KLSPEQKEIYKRKKSREQLIKRMGIDPDHNWEAHYEILPGKEKVVDELRKLAANADHVYL
ATDLDREGEAIAWHLREAIGGDESRYRRVVFNEITKSAIQEAFKDPGPLDIDRVNAQQAR
RFLDRIVGYMVSPLLWEKVARGLSAGRVQSVAVRLVVEREREIRAFIPEEYWTLFADTQT
AKTDALRLEVKKQSGEAFRPTNEEQAMSALKALQASDFEVTARDDKPTSSKPSAPFITST
LQQAASNRLGFSVKKTMMMAQRLYEAGYITYMRTDSTNLSAEAVSSVRDFIVENYGDKYL
PENPNRYSSKEGAQEAHEAIRPSDVRVKPNMLSGMERDAERLYTLIWQQFVACQMTPAQF
TSTSVVVTAGDFELRTRGRVIRFDGFLKVAPAQSKKDEDLVLPDIKVGEKLNLKKLDPKQ
HFTKPPARFSEAALVKELEKRGIGRPSTYASIISTIQDRGYVRLENRRFYAEKMGDIVTD
RLSESFTDLMDYGFTASLEESLDSVAEGNRGWKDLLNDFYSDFSARLEAAQDKEHGMRRN
APTDTDIECSQCGRHMQIRTGSTGVFLGCSGYALPPKERCTNTMNLVSGEEAVDADKDED
AETRQLREKRRCGKCGTAMDSYLVDEHRKLHICGNNPDCPGFEVEKGTFKIKGYDGPVIE
CDKCGADMQLKSGRFGKYFGCTSETCKNTRKLLKSGQPAPPKMDPVPMPELPCEKVEDTY
ILRDGASGLFLAASQFPKNRETRAPLIKELLPHKDEIDPKYSFLFSAPVEDNEGRDTVVR
FSRKTQEQYVQSEEEGKATGWKAFYRDGKWQVEEPAKKKPAVKKKAAAKKKAPAKKKAAA
KKAPSKKAPAK
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaatcactggtcatcgtcgagtcgccggcgaaggcaaaaacaatcaacaagtat
ctcggaaaggactttgtcgtgaagtccagtatcggtcatatccgggatcttcccaccggc
gcttccaacaagaagccggtcgatgccaaagagcgtgcccgtcgcgcggcggaaacccgc
aagctttctccggaacagaaagagatctacaagcgcaagaaaagccgtgaacagctgatc
aagcgcatgggaattgacccggatcacaactgggaagcccactacgagatcctgcccggc
aaggaaaaggtggtggacgagctacgcaagctcgctgccaacgccgaccacgtctacctc
gcaacggacttggaccgcgaaggggaagccatcgcatggcacctgcgggaagccattggt
ggtgacgagtcgcgctatcgtcgtgtggtgttcaatgagatcaccaagtcggcgatccag
gaggcgtttaaagatccaggtccgctggatatcgaccgggtaaatgctcagcaggcgcgc
cggttccttgaccgcattgtgggatacatggtgtccccgctgttgtgggaaaaagtcgcc
cgtggtctttccgctggccgggtgcagtcggttgccgtgcgtcttgtggtggaacgcgag
cgggaaattcgcgcgtttatccccgaggaatactggacgctgtttgcggatacgcagacc
gcaaaaaccgatgcgctgcgcctggaggtcaaaaagcagtccggcgaggccttccgcccg
accaacgaagagcaggcgatgtcggccctcaaggcgttgcaggccagcgattttgaggtc
actgcccgggacgacaagcctacgagctcaaagcccagtgcgccttttattacttcgaca
ctgcaacaagcggcgagcaatcgccttggtttcagcgtaaagaaaaccatgatgatggcc
cagcgtctgtacgaagcgggttacatcacctacatgcgtaccgactccaccaatctcagt
gccgaggcggtgtcttccgtacgcgactttatcgtcgaaaattacggcgacaagtacctg
ccggaaaaccccaaccgctacagcagtaaagagggcgcgcaagaagcgcacgaggcgatc
cgcccctccgacgtgcgggtgaagccgaatatgctgtccggcatggagcgggacgccgag
cgcctgtacaccttgatctggcaacagtttgtggcctgccagatgacgcctgctcagttc
acttccacctcggtagtggttactgcgggtgactttgaattgcgtacccgtggtcgcgtt
attcgcttcgatggtttcctgaaagtcgcgcccgcccagagcaagaaagacgaagatctg
gtactgcctgatatcaaggtcggcgaaaagctcaacctgaagaaactcgatccgaagcag
cactttaccaagccgccggcgcgcttcagcgaagctgcactggttaaagagctggaaaag
cgcggtatcggtcgcccgtccacctatgcgtcgattatttccaccattcaggaccgcggc
tatgtacggctggaaaaccgccgtttctacgcggaaaaaatgggcgacatcgtcaccgat
cgcctgagcgagagcttcaccgacctgatggattatggttttaccgccagcctggaggaa
tccctggattccgttgccgaaggcaatcgcggctggaaagacctgctcaacgatttctat
tccgacttcagcgcgcgcctcgaagccgcgcaggacaaggaacacggcatgcgccgcaac
gcaccgaccgataccgatatcgagtgcagccagtgcggtcgccatatgcagattcgcacc
ggttctaccggggttttccttggctgttccggctatgcactgccgcccaaagagcgttgc
accaacaccatgaacctggtgtccggtgaggaagcggttgacgcggacaaggacgaggat
gcggaaacccggcagctgcgcgaaaaacgccgttgcggcaaatgcggtaccgccatggac
agctacctggtggacgagcatcgcaaattgcatatttgcggtaataacccggattgcccc
gggtttgaggtggagaagggcacattcaagatcaagggttatgacggcccggtgatcgag
tgcgacaaatgcggtgcggacatgcagttgaaatcgggccgtttcggcaagtatttcggt
tgcaccagcgagacctgtaaaaatacccgcaaactgttgaaaagtggccagccggcaccg
ccgaaaatggacccggttccgatgcccgagcttccgtgcgagaaggtggaagatacctac
attcttcgcgatggcgcctcaggactgttcctcgcagcgagccagttcccgaaaaaccgg
gagacccgtgcgccgttgatcaaggaactgttgccgcacaaagacgagattgatccgaag
tacagcttcctgttctcggcgcctgtggaagacaatgaaggccgcgacaccgtggtgcgc
ttcagccgcaagacccaggaacagtacgtgcagtctgaggaagagggcaaggcaaccggt
tggaaagcgttctatcgcgacggcaagtggcaggtagaagagccggcgaagaagaaaccg
gcagtcaagaaaaaagctgctgcgaagaaaaaagcaccggcgaaaaagaaggccgccgcg
aaaaaggcgccctctaaaaaagcgcccgccaagtag
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