Microbulbifer hydrolyticus: GTQ55_13520
Help
Entry
GTQ55_13520 CDS
T06404
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
mhyd
Microbulbifer hydrolyticus
Pathway
mhyd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mhyd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GTQ55_13520 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mhyd03019
]
GTQ55_13520 (pcnB)
Enzymes [BR:
mhyd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
GTQ55_13520 (pcnB)
Messenger RNA biogenesis [BR:
mhyd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
GTQ55_13520 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
DUF2204
Motif
Other DBs
NCBI-ProteinID:
QHQ39900
UniProt:
A0A6P1TEF4
LinkDB
All DBs
Position
3144861..3146333
Genome browser
AA seq
490 aa
AA seq
DB search
MFNSLISSIKRWHSKPKANEGSDGDSPSGSGRKSRPSGKPSRKNPRPPKTSRVVVSRSDH
CLSRRDVSRAALTVMKRLQEAGFEAYIVGGGVRDLLLGGHPKDFDVATDATPEQAKELFR
GARIVGRRFRILHARIGREVIEVTTFRGHHSDGEAHEAQQSEHGMLLRDNVYGDLESDAV
RRDFTVNALYYTTNGFEIHDYTGGIRDIENRQIRMIGDPETRYKEDPVRMLRAVRFAAKL
DFDIEPVTAAPLKELAPLLRNIAPARMFDEVLKLLMSGQGERTFELLREHELWPHLFPDN
ARHLDAPEALALTRQALRNTDDRIRNDQRVTPAFLYAALLWPAVNSEQQFLAEKGIPPVP
ALAQAAQKITSNQLTHTAIPKRFSMPMREIWDMQSRLSRRGGERAFRLMEMPRFRAAYDF
LLLREDSGEIPAGLGQWWTEFQQADEEQRQQMIRDLPRNGPRGGKGRSRRNRGGRSRNRS
KQPNNGSERP
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgttcaattccctgatcagcagtatcaagcgctggcacagcaagcccaaagccaatgaa
ggctccgatggagattccccttcaggcagtggccgcaagtcccggccatccggaaagccc
tctcgcaagaatcctcgccctcccaagacctcccgcgttgtcgtttcacgcagtgaccat
tgcctgtcccgccgggatgtaagccgcgcggcgctgacggtcatgaagcggttgcaggag
gccggctttgaagcctatatcgtgggcggcggtgttcgcgatctgctgcttggagggcac
ccgaaagattttgacgtggctaccgatgccaccccggagcaagccaaggaactgttccgg
ggagcgcgcattgttggccgccgcttccgcatcctgcacgcccgtatcggtcgcgaggtg
atcgaggtcaccaccttccggggtcaccacagtgatggcgaggcccacgaggcgcagcaa
tccgagcacggcatgctgctgcgcgacaacgtctacggtgaccttgaaagtgacgcggtg
cgccgggacttcaccgtgaatgcgctctactacaccaccaacggtttcgaaattcacgac
tacaccggtggcatccgcgatatcgaaaaccgacagattcgcatgatcggtgaccccgag
acccgctacaaagaagacccggtgcgcatgcttcgcgctgtgcgctttgccgccaagctg
gacttcgacatcgagcctgtgaccgccgcccctctcaaagaactggcccccctgctgcgc
aacatcgcccccgcgcgcatgttcgatgaagtactgaagctcctgatgagcggccagggc
gagcgcacctttgaactgttgcgcgagcacgagttgtggccgcacctgttcccggacaac
gcccgccatctcgacgccccggaagcactcgcgctcacccgccaggcactgcgtaacacc
gacgacaggatccgcaatgatcagcgggtcacacccgcattcctgtatgcggccctgcta
tggccggcggtcaattccgagcagcaattcctggcggagaaaggcattcctccggtgccg
gcactggcccaggccgcgcagaagatcaccagtaaccagctcacccacacggccattccc
aagcgattctccatgcccatgcgggagatctgggatatgcaatcgcgcctgtcccgccgt
ggcggagagcgcgccttccgcctcatggaaatgccgcgtttccgcgccgcgtatgacttc
ctgttactgcgggaagacagcggcgagattcccgcaggccttgggcagtggtggaccgag
ttccagcaggcggacgaagagcagcgccagcagatgatccgggaccttccccgcaatggt
ccccggggcggcaagggccgcagtcgccgcaaccgcggcggacgcagccggaaccgaagc
aagcagccaaataacggctcggaacgcccgtaa
DBGET
integrated database retrieval system
