Microbulbifer hydrolyticus: GTQ55_13995
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Entry
GTQ55_13995 CDS
T06404
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mhyd
Microbulbifer hydrolyticus
Brite
KEGG Orthology (KO) [BR:
mhyd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mhyd03016
]
GTQ55_13995 (rnd)
Enzymes [BR:
mhyd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
GTQ55_13995 (rnd)
Transfer RNA biogenesis [BR:
mhyd03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
GTQ55_13995 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
DNA_pol_A_exoN
Motif
Other DBs
NCBI-ProteinID:
QHQ39986
LinkDB
All DBs
Position
complement(3261219..3262379)
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AA seq
386 aa
AA seq
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MMDQKKSTPVFERKLVDTAPVWIDSDEQLKELCDRLHTQGAVALDTEFMRSRTFYPLPAL
VQLGDGKRCYLIDNLAIDDLEPLRALLLDSRVVKIMHSCSEDLETLDRLLGVVPEPIFDT
QIAAAISGMGAGLGYAATVSQLLQIDLPKSETRSDWLQRPLSESQKNYAALDVAWLPLVY
AMLLKKLREQDRLDWLWEDCNAIVQAAHTPESPESYYRKVKGAWRLRPNQLAVLQDLCAW
REREARVRNMPRNHLLKENVCMSLAQAMPKYLATLSQPGLEGKTLRKYGDTLLEIINRAS
ERDDLPPRLPQPLNREQGEVLKLLRNKVNALAEAAGLPPEILVRKKELELLVQADKPELE
GRLQGWRRAIVGEPLLEELQSLRQSQ
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgatggatcagaaaaaaagcactccggtgtttgagcggaaactggtcgataccgcgcca
gtctggatagacagcgatgaacagctcaaagagctgtgtgaccggctgcatacgcagggt
gcggtggcgctggatacggaattcatgcgcagccgtactttttacccgctgccggcattg
gtgcagctgggggatggcaagcgctgttacctgatcgacaacctcgccatcgatgacctt
gagcccctgcgtgcgctgttgctggattcccgtgtggtgaaaatcatgcacagctgcagc
gaagacctggaaactctggatcggttactgggggtggtaccggaaccgattttcgacacc
cagatagctgcagccatcagcggaatgggggccggcctcggctacgcagccacggtcagc
cagttgttgcagatcgacctccccaagagcgaaacccgatcggactggctgcagcggccg
ctcagcgaatcccagaagaattacgccgcactagacgttgcctggctgccgctggtttat
gccatgttgctgaaaaaactgcgcgaacaggatcggctggactggttgtgggaagactgt
aacgcgattgttcaggccgcccacacaccagaatccccggagtcgtattaccgcaaggtc
aaaggtgcctggcggctgcgccccaatcagctggcggtactgcaggacctgtgtgcctgg
cgggagcgggaagcgcgcgtacgcaatatgcctcgcaaccatctgctgaaagaaaatgtg
tgcatgagcctggcccaggccatgcccaaatatctggccactctgtcgcagccggggctg
gaaggtaaaaccttgcgcaagtacggcgacaccctgctcgagatcatcaaccgggccagt
gagcgcgacgatttgccgccgcgcctgccgcaaccgctcaatcgcgagcagggcgaagtc
ctgaagttactgcgcaacaaggtcaacgcgctggctgaagccgctggtttgccgccagag
atcctggtgcggaaaaaagaactggagcttctggtgcaggcggataagcctgagctggaa
ggccgcctgcaaggctggcgccgtgcgatcgtcggcgagcccctgcttgaagaactgcaa
tccctgagacaaagccagtga
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