Microbulbifer hydrolyticus: GTQ55_16295
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Entry
GTQ55_16295 CDS
T06404
Name
(GenBank) pectin methylesterase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mhyd
Microbulbifer hydrolyticus
Pathway
mhyd00040
Pentose and glucuronate interconversions
mhyd01100
Metabolic pathways
mhyd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mhyd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
GTQ55_16295
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GTQ55_16295
Enzymes [BR:
mhyd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
GTQ55_16295
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Gene cluster
GFIT
Motif
Pfam:
Pectinesterase
Trypan_PARP
3keto-disac_hyd
Big_5
Laminin_G_3
DUF3859
DUF1349
TSKS
Motif
Other DBs
NCBI-ProteinID:
QHQ40379
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Position
complement(3853008..3856292)
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AA seq
1094 aa
AA seq
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MRVPSTLLATSMAALLGSLLTGCSDDGEKRELAELNNIVVAEPEPEPEPEPEPEPEPEPE
PEPEPEPEPEPEPEPEPEPEPEPAAFTCPETGLYFCDDFEDGEFASTWNALIDSYGLADP
GVFDILDEGDKGKSLRFTAGTRGENLSEGELILVKESAFGGVPEDYFVEYRIRPRQNGNT
GNKYLYSIGRYQGPLQWYFGGLNMQNSSDSTQVEAGYATTDDGITGSVSREVQVKKPILL
GEKDGTDGTWYNVRYDMVGNSVTVYLDGEEIGTYTDDASQFTTAGRIGFFTYNRSFEVDY
VKVGDPAVKPVQLTIDYAEPVWVTTAGKEPEVINVTAVKSDGVTADTFSVSSSDSSVVSV
AVDGTVVTLTPLAPGEAEISFVSGSDSGLRRTISASVAKAFEMPTATYGDISARVTPVPG
ATGEYEDTRLSITFDNAPTLNETLGSVRIFTVNGDSEIDAIYAGGEVDVLGYPGQDGARA
LNTTPFVIEGDTLTIAPHTGMLLPSTEYFVAISSDLVQGATLNGETFTGLGKDAGWTFTT
RASGPTGADVTVDDDGAADFRTVQGALNHVMENVAADEPATISIAAGDYHEVLFLTGKNN
LTISGAGVDQTRIFYDNYDGLNGGTAGRGLFLVSGGDMLTLEDLTIENTHQRTGAGDQAE
TIYFNSDGRLIARNAAFISEQDTLLLKGYNWFYNTLVAGNVDFIWGYSTASVFENSEIRS
LGDSKSTEATSGGGYVLQARTPVETAPGFVFLNSELTQGPSPTGVTIEQGTTYLARSGGS
SSYYDNVTFINTAMGTHVNAEGWAYEGINGQPAPNPATATAASGWREYGSTDLAGNPLDM
SSRCGTSGSCYALTAEEMEASFCSRAQIFAGWNGGEGWDPYPEDTSDDHCPSVTGSDETW
SGNGVLLGDPGSITTASGSITEQTDTSVTFTASDGKFETGMSFYLVSQQVTGDFTLTAKL
KSAGVPYAANQFPVGLMMCECDAASATNSPLAHIGMYLSGSDWVTQYGHVLADGGGWGKS
GDGAVLTPGDNLYFKLQRVGQQYKAYYSTDGGTTYSSGWGNTFTGLPDTIKVGLFAAPYN
DDQSFAFEDIQLVQ
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgagagtaccaagcaccttgttggccacctccatggctgcgttgctcggcagcctgctg
actggctgtagtgacgacggcgaaaaaagagagctggctgaactgaacaacatcgtcgtt
gcggaacccgaacccgaacccgagcccgaacccgaacccgagcccgaacccgaacccgag
cccgagcccgagcccgagcccgaacccgaacccgaacccgagcccgaaccggaacccgaa
ccggagccggcggcttttacctgccccgaaaccggtctctatttctgtgacgattttgaa
gacggtgaatttgccagtacctggaatgcgctgattgatagctacggccttgctgacccc
ggcgtgttcgatattctcgacgagggcgacaagggaaaatccctgcgctttaccgccggt
acccgcggtgaaaacctgagcgagggcgagctgattctggtgaaggagtccgcgtttggg
ggggtgcccgaggattacttcgtcgagtatcgaattcgcccgcgtcagaacggcaatacc
ggtaacaaatacctgtacagcattggccgttaccagggcccgctgcagtggtacttcggc
ggcctgaacatgcagaacagcagcgactccacccaggtggaagcgggctatgcaaccact
gacgatggcattaccggatcagtcagccgtgaagtgcaggtgaaaaagccgatcctgctg
ggtgagaaagacggtaccgatggtacctggtacaacgtgcgctacgacatggtcggcaat
agcgttaccgtttacctggacggggaagaaataggtacctacaccgacgatgcgagccag
ttcactacggccggccgtatcggtttcttcacctacaaccgctcgttcgaagtggactac
gtaaaagttggcgatcctgcggtcaagccggtacagctgaccatcgactacgccgagccg
gtgtgggttaccactgcgggaaaagagcctgaggtaatcaacgttaccgcagtgaaaagc
gatggtgttaccgcggatacctttagtgtcagctccagtgattcctcggttgtctccgtt
gcggtggatggcactgtggtgacactgaccccgctcgcgccaggtgaagccgagatctcc
tttgtcagtggttccgacagcggcctgcgacgcacgatcagcgccagcgttgccaaggca
tttgaaatgccgaccgccacctatggcgatatcagcgctcgggtcaccccggttcccggg
gctaccggcgagtacgaagacacccgtctcagtattaccttcgacaacgcgccgacgctg
aatgaaacccttggttctgtgcgtattttcacagtcaatggggatagcgagattgacgct
atctacgcgggtggggaggtcgatgtgctcggctatcccggccaggacggcgcccgtgca
ctcaacaccacaccgttcgtgatcgagggcgataccctgaccatcgcgccgcacaccggc
atgctgttgccgagtaccgagtactttgtggccatcagctccgacctggttcagggtgca
acgctgaatggagaaacgtttaccggtctgggtaaagatgcgggctggaccttcaccacc
cgggcatccggccccaccggtgccgacgtcaccgtggacgacgacggcgctgcggatttc
cgcacggtgcagggtgccctgaaccatgtaatggaaaatgtcgcagcggatgagcctgcc
actatctccatcgctgcaggggattaccatgaggtgctgttcctcaccggtaaaaataac
ctcaccatcagcggtgccggtgtcgaccagacacgtattttttacgacaactacgatggc
ctgaacgggggtaccgcagggcgggggttgttcctggtgagtggcggcgacatgctgacc
ctggaagatctcactattgagaacacccatcagcgtaccggtgctggtgaccaggcagag
accatctactttaacagtgacggtcgactgatcgcccgcaacgccgcgtttatctccgag
caggacaccctgctgctgaagggctacaactggttctataacaccctggttgcaggcaat
gtggactttatctggggctacagcaccgccagcgtatttgagaattccgagatccgctca
ctgggtgattccaaaagtactgaggcgaccagcggtggtggctatgttctgcaggcgcgc
accccggtagaaaccgcaccaggctttgtattcctgaattcagaactgacccagggcccc
agcccgactggtgtcaccatcgagcagggcactacctacctggctcgcagtggcggtagc
agcagctattacgacaatgtcactttcatcaacaccgcaatgggcacccatgtaaacgcg
gaaggttgggcgtatgaaggcatcaacggccagcccgctcccaatcctgccaccgcaacc
gccgccagtggctggcgcgagtacggcagcaccgaccttgccggtaacccgctggatatg
agcagccgctgcggtacctccggcagctgttacgcgctgaccgcggaagagatggaagcc
agcttctgttcccgtgcgcagatctttgccggctggaacggtggtgagggctgggatccg
tacccggaagataccagtgacgatcactgtccctcagtaactggatcggatgagacttgg
agtggtaatggcgtgctgttgggtgacccgggctccattaccaccgcaagcggttcaatc
accgagcaaaccgataccagcgttacctttactgccagcgacggcaagtttgaaactggc
atgtctttctatctggtatcccaacaggtaaccggtgactttaccctgacggcgaaactg
aaaagtgccggcgtaccctatgcagccaatcagttccccgtggggctgatgatgtgtgag
tgcgacgctgccagcgctactaactcgccactggcgcatatcggtatgtacctgtccggc
agcgattgggtgacccagtacggccatgtacttgccgatggtgggggttggggcaagagt
ggcgatggcgccgtgctcactccgggcgataacctctactttaagttgcagcgggtaggg
cagcagtacaaggcctattactcgaccgatggcggcaccacatattccagtggttggggc
aacaccttcaccggcttgccagataccatcaaagtcggattgttcgccgcgccttacaac
gacgatcagagcttcgctttcgaagatattcaactggtgcaataa
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