Microbulbifer hydrolyticus: GTQ55_16535
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Entry
GTQ55_16535 CDS
T06404
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
mhyd
Microbulbifer hydrolyticus
Pathway
mhyd03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mhyd00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
GTQ55_16535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mhyd03019
]
GTQ55_16535
03009 Ribosome biogenesis [BR:
mhyd03009
]
GTQ55_16535
Messenger RNA biogenesis [BR:
mhyd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GTQ55_16535
Ribosome biogenesis [BR:
mhyd03009
]
Eukaryotic type
Pre-60S particles
RNases
GTQ55_16535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QHQ40935
UniProt:
A0ABX6J3S1
LinkDB
All DBs
Position
complement(3928173..3928718)
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AA seq
181 aa
AA seq
DB search
MVDQNNLIWIDLEMTGLDPEKERIIEIATVVTDSRLNVLAEGPVMAIHQSDALLAAMDDW
NTEQHGGSGLVARVKESPISEHQAERDTIEFLQQWVPEGASPMCGNSIGQDRRFLVKYMP
LLERYFHYRNLDVSSVKELARRWRPDVLDGVKKTSSHLALDDIHDSINELKHYRAHFFRM
S
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
attgtggatcagaataatctgatctggatcgatctggaaatgacaggcctcgatcccgag
aaggaacgcatcatcgagattgccacagtggtgacggattcgcgcctgaacgtactggcg
gaagggccggtaatggcgatccaccagagcgatgcgctactggccgccatggacgactgg
aacacggagcagcatggtggctccgggctggtggcgcgggtgaaggagtcgccgatcagt
gagcatcaggcggagcgggacacgatcgaattcctgcaacagtgggtgcccgaaggtgcc
tcgcccatgtgtggcaactccattggccaggatcgtcgcttcctggtgaagtatatgccg
ttactggagcgttatttccattaccggaatctggatgtcagctcggtgaaagaactggcg
cggcgctggcgcccggatgtgctggatggggtcaagaaaacctcctcgcatctcgcgctg
gacgatattcacgactccatcaacgagctcaagcactaccgggcgcacttcttccgcatg
agctga
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