Microbulbifer hydrolyticus: GTQ55_17475
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Entry
GTQ55_17475 CDS
T06404
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mhyd
Microbulbifer hydrolyticus
Pathway
mhyd03030
DNA replication
mhyd03410
Base excision repair
mhyd03420
Nucleotide excision repair
mhyd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mhyd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GTQ55_17475 (polA)
03410 Base excision repair
GTQ55_17475 (polA)
03420 Nucleotide excision repair
GTQ55_17475 (polA)
03440 Homologous recombination
GTQ55_17475 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mhyd03032
]
GTQ55_17475 (polA)
03400 DNA repair and recombination proteins [BR:
mhyd03400
]
GTQ55_17475 (polA)
Enzymes [BR:
mhyd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GTQ55_17475 (polA)
DNA replication proteins [BR:
mhyd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GTQ55_17475 (polA)
DNA repair and recombination proteins [BR:
mhyd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GTQ55_17475 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GTQ55_17475 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
QHQ40594
LinkDB
All DBs
Position
complement(4146958..4149702)
Genome browser
AA seq
914 aa
AA seq
DB search
MSNDKTSSAPLILVDGSSYLYRAFHALPPLATSQGQPTGAVRGVISMLRKHLKEHPDSPV
VVVFDAKGKTFRDELFEDYKSHRPPMPDDLRAQIQPIHDIIDAMGLPRLVIEGVEADDVI
GTLALQAADKGIEVIISTGDKDMAQLVRPGVTLVNTMSNTVLDVEGVKEKFGVGPELIID
FLALMGDKSDNIPGVPGVGEKTALALLQNLGSLKDIYADLDAIAPLGFRGSKTLAKKMAE
HKQAADMSYLLATIKTDVEMDYRPETLANSEPDTDKLREMFSELEFRSWVDELGGSDDAD
SAAEALVVERNYSIITDEKELDLWLEKLKSADIFAFDTETTSLNYMQAKLVGVSFAVEAG
EAAYLPLAHDYMGAPAQVDFDSALRKLKPLLEDERLKKVGQNLKYDSHILANYDIQLRGI
ARDTMLESYILNSTASRHDMDSLAQKYLGESTVKFEDIAGKGAKQLTFNQIELDKAGPYA
AEDADITLRLHQDLSGRLAKEPSLEKVLDEIEMPLLPVLVHIERNGAYIDAAMLKKQSGE
LEQKMRELEQQAYEEAGEEFNLGSTKQLGTILFEKLEIPVIKKTPKGAPSTAEPVLQELA
LSHKLPALIMQYRGMAKLKNTYTDKLPQMIDPATGRVHTSYHQAVAATGRLSSSDPNLQN
IPIRTEEGRRIRQAFVADPRINGGSVIVAADYSQIELRIMAHLSGDKGLLDAFAEGADIH
RATAAEVFEVPADEVTDEQRRRAKAINFGLIYGMSAFGLAKQLDIPRADAQTYIDRYFER
YPGVLDYMESTRKQAAEKGYVETLFGRRLYLPEINSRNGMQRQAAERTAINAPMQGTAAD
IIKRAMIAADTWLREEKLKSRLIMQVHDELVLEVPADERDLVVKRIPELMQAAAELDVPL
IADLGEGANWDEAH
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgacaagacttcttctgcgccactgatcctggtagatggctcctcttacctg
taccgtgcttttcatgccctgccgccgctggccaccagccagggccagcccaccggcgcg
gtgcggggggtaatttccatgctgcgcaagcacctcaaggagcatccggacagcccggtg
gtcgtcgtttttgacgccaaaggcaagaccttccgcgacgagctgttcgaagactacaag
tcccatcgcccgcccatgccggacgacctccgtgcgcagatccagccgatccacgacatc
atcgatgcgatgggtctgccgcgtctggtcatcgagggtgtggaagccgacgacgtcatc
ggcaccctggccctgcaagctgccgacaagggcatcgaagtgatcatctccaccggtgac
aaggacatggcccagctggtgcgccccggggtgacgctggtgaataccatgtccaacacc
gtgctcgatgtggaaggggtgaaggaaaagttcggcgttggcccggagctgatcatcgac
ttcctcgccctgatgggtgacaagtccgacaacatcccgggggtgccaggcgtgggtgag
aaaaccgcgctggcgctgctgcagaacctgggcagcctgaaagacatttacgcggacctg
gatgcaatcgcgccactcggcttccgcggttccaagacgctggcgaagaaaatggcggag
cacaaacaggctgcagacatgtcctatttgctcgccaccatcaagaccgatgtggaaatg
gactaccggccggagacactggccaacagcgagccggatacggacaagctgcgggaaatg
ttcagcgagctggaattccgcagctgggtggatgaactcggtggcagtgacgacgcggac
tctgcggcggaagcactcgtagtggagcgaaactacagcatcatcaccgatgagaaagag
ctcgatctctggctggaaaagctgaaatccgctgacatcttcgcgtttgacacagaaacc
accagcctcaactacatgcaggcgaaactggtaggggtgagttttgccgtagaagccggc
gaggccgcgtatttaccgctggcccacgattacatgggggctccggcgcaagttgatttc
gacagcgcgctgagaaaactgaaaccgctgctggaagacgagcgcctcaaaaaggtgggg
cagaacctcaagtacgacagccatattctcgccaattacgatatccagctgcgtggcatc
gcacgcgataccatgctggaatcctacattctcaacagcactgccagccgccacgatatg
gacagcctcgcgcagaagtacctgggcgaatccacggtcaagtttgaagatatcgccggc
aagggtgccaaacagctcaccttcaaccagatcgagctggacaaggcaggcccctacgcg
gcggaagatgccgacatcaccttgcgcctgcaccaggacctgagtggacgcctggccaaa
gagccgagtttggaaaaggtgctggacgagatcgagatgccgctgctgccggtgctggtg
catatcgagcgcaacggggcctatatcgacgcggcgatgctgaaaaaacagtccggcgag
ctggagcagaaaatgcgcgagctggaacagcaggcgtatgaggaagccggcgaggaattc
aatctcggctccaccaaacagctgggcaccatcctgttcgagaaactcgagatcccggtg
atcaagaaaacccccaagggagcaccttccaccgccgaaccggtgttgcaggaactggcc
ctgtcgcacaagctgccggcgctgatcatgcagtaccgcggcatggccaagctcaagaac
acctataccgacaaactgccgcagatgatcgacccggcaaccggccgtgtacacacctcc
taccaccaggcggtggcggccaccggccgcctgtcgtcctccgaccccaacctgcagaac
atcccgattcgtacggaagaaggccgccgtatccgtcaggcgtttgtggctgatccgcgg
attaacggtggcagcgtgatcgtggccgcggattactcgcagattgaactgcgcatcatg
gcgcacctgtccggcgacaaggggctgctggatgcgtttgccgaaggtgccgacattcac
cgcgccaccgccgccgaggtattcgaagtgccggccgacgaggtgaccgatgagcagcga
cgccgcgccaaggcaatcaacttcggcctgatctacggcatgagtgcatttggcctcgcc
aagcagctggatatcccgcgtgcggatgcccagacctatatcgaccgctacttcgagcgc
tacccaggtgtactcgactatatggagagcacccgcaaacaggcggcggagaagggctat
gtggaaaccctgttcgggcgccgcctgtacctgccggagatcaattctcgcaacggcatg
cagcgccaggcggcggagcgcaccgcgatcaatgcaccgatgcagggcacggcagcggac
attatcaagcgcgcgatgatcgcggcggatacgtggctgcgtgaagaaaaactcaagtcc
cgcctgatcatgcaggtgcacgatgaactggtactggaagtgccagccgacgagcgggat
ctggtggtcaagcgaattccggaactgatgcaggccgccgcggaattggatgtgccgctg
atagcggacctcggggaaggggccaactgggacgaggcgcactaa
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