KEGG   Mesomycoplasma hyopneumoniae 168-L: MHP168L_096
Entry
MHP168L_096       CDS       T02675                                 
Name
(GenBank) Excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
mhyl  Mesomycoplasma hyopneumoniae 168-L
Pathway
mhyl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mhyl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    MHP168L_096
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mhyl03400]
    MHP168L_096
DNA repair and recombination proteins [BR:mhyl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     MHP168L_096
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      MHP168L_096
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran RsgA_GTPase nSTAND3 SMC_N AAA_14 AAA_29 nSTAND1 AAA_16 ATPase_2 AAA_33 DnaJ_CXXCXGXG AAA_25 APS_kinase AAA_22 ATPase NACHT FtsK_SpoIIIE SLFN-g3_helicase Viral_helicase1 DAP3 MeaB NTPase_1 NB-ARC MMR_HSR1 cobW
Other DBs
NCBI-ProteinID: AGM21874
LinkDB
Position
complement(111307..114150)
AA seq 947 aa
MLKNKDTHNFIYIKGARENNLKNINLVLPKNKLIVFTGLSGSGKSSLAFNTIYEEGKRRY
IDSLSSYARQFLGGTKKPKVDAIYGLLPTISVEQKTSHNNPRSTVGTITEIYDYFRLLYA
KIGKAFCPNHKVEIIAQKIVTILDTILAYPEKTKLIIMAPIIEGEKGNHQNLIKNLKNQG
FLRIKINKSFYYLADDIKLDPKQKHTIWVVIDRFLLEKEDKNRLQSALELAFDLGKGIAL
CEFNESETIRFSKLQACPFGDFEMPNLENRLFSFNSPYGMCQVCKGLGTNLEADFDLIVP
DKNLTINQGAIKYFGKSINTKSLEWQEFKILLDYFEISADLEIVKMKKNELEIIKYGSKE
SLNYWLISESGKRYDYFRPIEGILNKIQRKFWETSSEDLRLWFKKMMSEFPCSSCKGARL
NKYALAVFIEKYNIFQLSQLSIKDLITFFRNLKLTEFDGKISTLILDEIKSRLSFLANVG
LEYLTLNRSTATLSGGESQRIRLASQVGSQLTGILYVLDEPSIGLHQKDNDKLIATLKKM
VEIGNSLIVVEHDFETILAADYIVDIGPKAGENGGFLVAAGSIKDIENEPKSLTGQFLTG
KLEIPVPKKRRAGNGKFIIIEKAAENNLKKINVNIPLGKFVVVTGVSGSGKSTLVNQIIV
NAIAKNLGTTNIRIGKCEEIRGLFNIDKLIAINQSPIGRTPRSNPATYTSVFDDIREVFA
NTEQARALGFSKSKFSFNLQTGRCDKCQGDGQIKIEMYFMPDIYVLCDHCQGKRYKPDVL
QIRFYGKTIADILDLTVSEALEFFHNWPKIIAKLQTLADVGLGYIKLGQSAITLSGGEAQ
RIKLATFLQKKPTGKSLFVLDEPTTGLHNYDVANLIKVLNRIVDNGDSIIVIEHNLEVIK
VADYIIDLGPNGGDNGGQIVAKGTPEAVAKVSESYTGTYLKTILNIK
NT seq 2844 nt   +upstreamnt  +downstreamnt
atgcttaaaaataaagacactcacaattttatctacattaaaggcgcacgcgaaaacaat
ttaaaaaatattaatcttgttcttccaaaaaataaactaatagtttttacgggactttca
ggttctggtaaatcttcgctcgcttttaacactatttatgaggagggaaagcgccgctat
attgattctttaagttcgtatgctcggcaatttttaggtgggacaaaaaagccaaaagtt
gatgcaatttatgggcttttacccacaatttcagtcgaacagaaaacaagtcataacaat
ccgcgttcaacagttggtacaattacggaaatttatgactattttcggcttttatatgca
aaaattgggaaagcattctgcccaaaccacaaagttgaaattatagctcaaaaaattgtc
acaattttggatacaattttagcatatcctgaaaaaacaaaacttataattatggcgcca
attatcgaaggtgaaaaagggaatcaccaaaatttaattaaaaatcttaaaaatcaaggg
tttttgcgcataaaaattaataaatctttttattatttagctgacgatattaaactcgac
ccaaaacagaagcacacaatttgggtagtgattgatcgatttttgcttgaaaaagaggac
aaaaatcgacttcagtcagcattagaacttgcctttgatcttggaaaaggaattgcgctt
tgtgaatttaatgaatctgaaactatcagattttcaaaattacaagcctgtccttttggt
gattttgagatgccaaatcttgaaaatcggcttttttcttttaattcaccttatggaatg
tgccaggtttgtaaaggtttgggtacaaatttggaggctgattttgaccttattgttccg
gataaaaatttaactataaatcagggagcgattaaatattttggaaaatcaataaataca
aaatcacttgaatgacaagaatttaaaattttacttgattattttgaaatctcggctgat
ctagaaatagtaaaaatgaagaaaaatgagcttgaaataatcaaatatggatcaaaagaa
tctctaaattactgactaatttctgaaagcgggaaaagatatgactatttccgaccaatt
gaaggaattcttaataaaattcagagaaaattttgggagacatcaagcgaagatttacga
ctttgatttaagaaaatgatgtcagaatttccttgtagtagttgcaaaggagcccggctt
aacaagtatgcgcttgccgttttcattgaaaagtataatatctttcaattatcccaactt
tcaattaaagatttaataactttttttagaaatttaaaattaactgaatttgacggaaaa
atttctactttaattctcgatgaaattaaatcacgactgtcatttttagcaaatgttggt
cttgaatatttaactttaaatagatcaacggcaaccttatcaggaggcgaatcccaacga
attaggcttgcaagccaggttggatctcaactaaccggaattctttatgttcttgatgaa
ccttcaattggcctacatcaaaaagataatgacaaattaattgcgacactgaaaaaaatg
gttgaaattggtaatagtttaattgtagtcgagcatgattttgagacaattttagctgct
gattatattgttgatatcgggccaaaagctggtgaaaacggtggttttttggttgctgca
ggatcaattaaggatattgaaaatgaaccaaaatcacttaccggccaatttttaactgga
aaattggaaattccagtaccaaaaaaacgacgggctggcaatggcaaatttataattatt
gaaaaagctgctgaaaataatttaaaaaaaattaatgtcaacattcctctaggcaaattt
gttgttgtcactggtgtttctggatctggaaaatcgacattagttaatcaaattatcgta
aatgcgattgccaaaaatcttggaacaactaatattcgcattggaaaatgcgaggaaatt
agagggctttttaatattgataagttgattgcaatcaatcaaagtccaatcggacgaacc
cctagatcaaatcccgcaacttatacctctgtttttgatgatatccgtgaggtttttgcc
aatactgagcaggcaagagcacttggtttttcaaagtcaaaattttcctttaatctgcaa
actgggcggtgtgataaatgccaaggagacgggcaaattaaaattgaaatgtattttatg
cctgatatttatgtcttatgtgatcactgccaaggaaaaagatacaagccggatgtccta
caaattcgtttttatggaaaaacaatcgcggatattcttgatttaacagtttcagaagca
cttgaatttttccataattggcctaaaataatcgcaaaattacaaaccctagctgatgtt
ggtcttggttatataaaacttggccaatcagcaataactttatcaggaggagaagctcaa
cgaattaaattagccacttttttacaaaaaaaacctacaggaaaatcactttttgtactt
gacgagccaacaactggactccataattatgatgtcgctaatttaattaaagtgctaaat
cgaatagtagataacggtgatagtataattgtaatcgagcataatttagaggtaattaaa
gttgctgactatattattgatttaggtccaaacggcggagataacgggggccaaatagtt
gcaaaaggaacaccagaagctgtagcaaaagttagtgaatcatatactggcacttattta
aaaacaattttaaatataaaataa

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