Mesomycoplasma hyopneumoniae 168-L: MHP168L_625
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Entry
MHP168L_625 CDS
T02675
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mhyl
Mesomycoplasma hyopneumoniae 168-L
Pathway
mhyl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mhyl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MHP168L_625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhyl03021
]
MHP168L_625
03400 DNA repair and recombination proteins [BR:
mhyl03400
]
MHP168L_625
Enzymes [BR:
mhyl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MHP168L_625
Transcription machinery [BR:
mhyl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MHP168L_625
DNA repair and recombination proteins [BR:
mhyl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MHP168L_625
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
DUF4350_C
RnfC_N
Peptidase_M23
AF1548-like_C
Biotin_lipoyl
Motif
Other DBs
NCBI-ProteinID:
AGM22392
UniProt:
A0ABM5NQ01
LinkDB
All DBs
Position
complement(808437..812099)
Genome browser
AA seq
1220 aa
AA seq
DB search
MNHIYKLKSYGIGTDRRFYGVANKTLETPDFLDPVRESFDWFLHVGIPEAFDRIFPIVSA
NGKLEISFRRGSLRVEKPENEYLAIREAKIKGKTYSARVYVTLVKVHSEDGEMEEQEILL
AEFPFMTQGGTFIINGFEKVVVSQLIRSPGVCFRENVRNQQADDLFNKVEIIPQLGSWME
IFHKVTGNQVDTVKFRIDKHKNIPLLSFLRAIGFTNETVRKYFGNSPELLESIRRHKLES
LEENLELIYRIVRKDDRITEEGLKNLIPSIIFNERRYNLASTGRFMLNAKLNLVERISQT
YLAEDLVSKKNKILFKKGTYITRQLALEIQEKFNNEEIPLSEIEGVDSTIYARQLEITRN
ENLWKRFYVAIVKVWPNKKSMLQESEPVNVIATDPNLNEKTLVLSDIIAIVSYYFNLLSN
LGKSDDPDSLVNKRIVSVGELLQNQFLIALTKIEKNSKEKISTKSDLSQLTVKSIINNKP
IYNQFKNFFNSSKLSQFMDQINPLGEMASKRKVTSLGPGGLNRDTAQFEVRDVHTTHYGR
ICPVETPEGQNIGLILNFSVFSRINQYGFIITPYYQVKNRIVDYSKVHWLAASEEFDKSF
AQSGVEIDQNNRIIPDKLTVRKNQTYLVLDAEQVNYIDVSSMQMTSISASAIPFLENNDA
NRALMGSNMQRQAVPLIKSEAPLVATGIEEAVARFSATNLRAAISGKVTYVDAKKIIIDD
GEKPEIHYLRYFEKSNQETLILQKPTVKVGDKVKKGQLICDGPSTDNGELALGKNVLVAF
STWYGYNYEDAIIISEKLVKDDVFTSIHIQEQTIKFRSTKAGNDILTAEIPNASAKSRLH
LDANGIVIVGSEVDTGDILVGRTSPKGEDNPTAEEKLMAAIWGKKALAQKDTSLRVKNGE
GGTVIDVQILSRDQGDNLEEGVGMLIKILIAQKRKIKVGDKMAGRHGNKGVVSVILPVED
MPFLEDGTPVDIVLNPQGVPSRMNIGQVLELHLGMVAKKLKTKFVTPVFDGIKIETIKKL
FDEANIPESGKFKLFDGISGQAFENPVSVGYMYMLKLLHMVDDKMHARSIGPYSLTTQQP
LGGKSQNGGQRFGEMETWALESFGATSVLSELLTYKSDNIQGRNLLYNNIISGGKIPSPG
TPESFNVLAYELRGLLIKLEVHKNDQENQEVEEIKDPLELPEIPSNFIDEYNQDGRIELN
KLEEFADFDEENIDFDKLTR
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgaatcacatatataaattaaaatcctatgggattggcactgatcgtcgcttttatggg
gttgcgaataaaaccttagaaactccggattttctagatccggtgcgtgaatcttttgat
tggtttttgcatgtggggattcccgaagcttttgatcgaatttttccaattgtttcagca
aatggaaaattagaaataagttttcgccgcggttcacttcgggtagaaaaacctgaaaat
gaatatttagcgatccgcgaggcaaaaattaaaggtaaaacttattctgccagagtttat
gtaacccttgtcaaagttcattccgaagatggggaaatggaagaacaggaaattttacta
gcagaattcccgtttatgactcagggcggaactttcataatcaatggttttgaaaaagtt
gttgtttctcaactaattcgttctccaggagtttgttttcgtgagaatgttagaaatcaa
caagcagatgacctttttaataaggtagaaattattccccaacttggttcttgaatggaa
attttccataaagttactggaaatcaagtcgatactgttaaattcagaatcgataaacat
aaaaatattccattattatcatttttacgtgcaatcggttttacaaatgagacagtaaga
aaatattttggaaattcccctgaacttcttgaatcaatcagaagacataaactagaatca
cttgaagaaaatttagagctaatttatcgaatagtcagaaaagatgatcggatcaccgaa
gaaggtctaaaaaatcttattccttcaataatttttaatgaaagacgttataatttagct
tcaacaggccgttttatgctcaatgccaagctaaacttggtcgagcgaatttcccagact
taccttgccgaagatttagtatcaaaaaaaaataaaattttatttaaaaaagggacttat
atcacaaggcagttagccttagaaattcaagaaaaatttaacaatgaagaaattcctctt
tccgaaattgaaggagttgattcaacaatttatgcccggcaacttgaaattacccgtaat
gaaaatttatggaaacgcttttatgtagcaattgttaaagtttggccaaataaaaaatca
atgttacaagaaagtgagcctgtaaatgttattgcaactgatccaaatttgaatgaaaaa
accttagttttatcagatattattgcaattgtttcttattattttaatttattaagtaat
ttagggaaaagtgatgatccagattcgcttgttaataaacggatagttagtgttggcgaa
cttttacaaaatcaatttttgattgcacttacaaaaattgaaaagaattctaaggaaaaa
atttcaacaaaatcggatctttcgcagttaacagtaaaatcaattattaataataagcca
atttataatcaatttaaaaattttttcaactcttcaaaactttcgcaatttatggaccaa
attaacccgcttggcgaaatggcaagtaaaagaaaagttacctcacttggccctggcggt
ctaaatcgtgatactgctcaatttgaagtccgggatgttcatacaacccattatggtaga
atttgtccagttgagactcccgaggggcaaaatataggtctaattcttaatttttcagtt
ttttcgcgaattaatcaatatggttttattatcaccccttattatcaagtaaaaaatcgc
attgttgactattcaaaggttcactggctagccgcatcggaagaatttgataaaagtttt
gcacaatcaggagttgaaatcgatcaaaataatcgaattatccctgataaattaacagtt
agaaaaaatcaaacttatcttgtccttgatgccgaacaagtcaattacattgatgtttct
tcaatgcagatgacatcaatttctgcttccgcaattccctttttagaaaataatgatgca
aatagagcgttaatgggatctaatatgcagcgccaagccgtgccgttaattaaatcagaa
gccccacttgttgctaccggaattgaagaagccgttgcccgtttttcagcaacaaatctc
cgcgcggctattagcggaaaagttacttatgttgatgcaaaaaaaatcatcattgatgat
ggcgaaaaaccggagattcattacctccgttattttgaaaaatccaatcaagaaacctta
attttacaaaaaccaaccgttaaagttggtgataaagtcaaaaaagggcagttgatctgc
gatggtccttcaacggataatggcgaacttgccctaggtaaaaatgttcttgtcgctttt
agtacttgatatggttataattatgaagatgcaattataattagcgaaaagctcgtaaaa
gacgatgtttttacctcaattcacattcaagagcaaacaattaaatttcgttcaacgaaa
gccggaaatgatattcttaccgccgagattcctaatgcatcggctaaatctcgtcttcat
ttagatgcaaatggaattgtaattgttggttcagaagttgatactggcgatattttagtt
ggtcgaacttctccaaaaggggaagataatcccactgcggaagaaaaattaatggcagca
atctgagggaaaaaagcgcttgcccaaaaagatacttccctccgggttaaaaacggcgaa
ggcggaactgtaattgatgtccagattctttcccgtgatcaaggagataatcttgaagaa
ggcgttgggatgctaataaaaatcttgattgcccaaaaaagaaaaattaaagtcggggat
aaaatggccggaagacacggaaataaaggggttgtttctgtaattcttccagttgaagat
atgccgtttttagaagatggaactccggttgatattgtcctaaacccgcaaggggtacct
tcgcggatgaatatcggtcaggttttagagcttcatttagggatggttgccaaaaaatta
aaaacaaaatttgtcactccggtttttgatgggatcaaaattgagaccatcaaaaaatta
tttgatgaggcaaatattcctgagtcaggaaaattcaaattatttgatggaattagtggc
caagcctttgaaaatcctgtttctgttggttatatgtatatgctaaaattactacatatg
gtcgatgataaaatgcatgcaagatcaattggcccttattcacttacaacccagcaacct
ttagggggaaaatcccaaaatggaggacaaagatttggtgaaatggagacttgagcactt
gaatcttttggggcaacttccgttctttctgagcttttaacttataaatctgataatatt
caaggacgaaatttactttataataatataatttcagggggaaaaattcctagtccggga
accccagaatcatttaatgttttagcctatgaacttcgtggacttttgattaaattagaa
gttcataaaaatgatcaagaaaatcaagaagttgaagaaataaaagatcctttagaatta
cccgaaattccatctaatttcattgacgaatataatcaagatggccggattgaactaaat
aagctagaagaatttgctgattttgatgaagaaaatatcgactttgacaagttgactaga
taa
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