Metamycoplasma hyosynoviae: MHSN_01630
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Entry
MHSN_01630 CDS
T05673
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mhyv
Metamycoplasma hyosynoviae
Pathway
mhyv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mhyv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MHSN_01630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhyv03021
]
MHSN_01630
03400 DNA repair and recombination proteins [BR:
mhyv03400
]
MHSN_01630
Enzymes [BR:
mhyv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MHSN_01630
Transcription machinery [BR:
mhyv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MHSN_01630
DNA repair and recombination proteins [BR:
mhyv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MHSN_01630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
ASI53894
UniProt:
A0A4P1QGE2
LinkDB
All DBs
Position
428607..433022
Genome browser
AA seq
1471 aa
AA seq
DB search
MKKSRKYALLDSDKISKISLALATPEDVEKWSHGEVTKPETINYKSYKPERGGLFDEIIF
GPMIDYRCPVCGHKWKKINEGSFCTKTELCKQEHVEILPKISRRNHMGHIKLNSPVVHFW
FFKVDHSIIYKLLGLKVANNEEPVKRIDLENLIYYKSHIVLESGGLKSLPKNTIIDINEA
ANIYKSALEELIQRFEKGTEEYEDIRETLDDLVEKATSKIGQDYGIDFYELNMVIEHYTE
AKIGTGSLAIEYLLKNIDLKHEKELVMQEIKQINIDEVEGRWSTTSKQNREKLYKRLQVL
NAFIESGQKPTSMLIYNLPVIPADLRPLIQLDGGRHSSSDINELYRRVIIRNNRLKQWQE
KDAPTLVVQNELRMIQEAVDALIDNQRRTPSPVLSKDNRPFKSISDALTGKKGRFRQNLL
GKRVDYSGRSVIVVGPELKMHQCGIPREMAAKLFEPWIVESLIDNGEATTVKQAKKMIED
QNSVIWPYVAKAIEGRLVLLNRAPTLHRLSIQAFEPVLVRGKAIKLHPLVCTPFNADFDG
DQMAVHVPVSEQALLEARELMLANKNILGPKDGEPIINPSQDMVLGIYYLTIEEEGALGE
GRIFDSFDHMMRVYAERKVSLHARVALPLSEVKDAKLFNIPVSKREYIISTVGKFIFNNI
FPRTFSFIYDNNVAKYTTLEQYNQSMYKYIVPSGTNILEYIKRNLTILPAFNKKNIARII
RHIFDKYVATVSLQKVASVIAKINEISSDDIILEYLSLTNYEDKKINKEHAILLNAFTHE
EMKKNVLYSQAKSSSTALHTYSPEQKANILDRVWFRYTNIVASILDDIKDLGFEYSTISG
ISISFSDILETNMKSKYIKEGDDYISQLREYYNQGMITDDDRYKLTIEKWSNVKNNIQKE
LEQIIKENPQNPVITMINSGARGNISNYVQLAGMRGLMANNIKTTKADARNDRIVRSTVE
MPVKSSFIEGLTAFEFYSSTHGARKGLTDTALNTAKSGYLTRRLVDVAQNIVVREENCGS
DYGYIACTIVDTKTNQVIVGLKERIVGRFANKPIFKQDGSTLIVPRNGLITEKIADIILQ
EGYTEIEIRSILGCNTRNGVCKLCFGNDLATNRIVNIGEAVGIIAAQSIGEPGTQLTMRT
FHTGGVAGGEDITGGFARLIELIDAHEQPWGRPAVISPYEGKIVKIEENTENKNIVSHIV
YIEHKLSDGEIEITPIEVTSNKKLRVSEGSSVRIGQKLSEGPIILKELLELTDTITVQNY
LLKEIQKIYRIQGIAISDKYIEIIIRQMMSKIVISNPGDSKFFAGAIVDIFDYQEENANL
LAEGKKPAYGTVVIKGAKQVPLLSDSFLSAASYQETSKILVHAAISSRSDKLLGLKENII
IGKKIPAGTSLFPFEENSKYDIRPSINYFRSPEEDEEMTFDSFAPLDLEEIRNEVDSETE
PMVSVEDEENQEEFIFDEEAEDDDAQNADYE
NT seq
4416 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatcaagaaaatatgcactattagatagtgacaaaatttcaaaaatttcacta
gctttagctactcctgaagatgttgaaaaatgatcacacggtgaagttacaaaaccagaa
accataaactataaatcatataaacctgaacgtggtggactatttgatgaaatcattttt
ggtcctatgattgactatcgttgtcctgtttgtggtcataaatgaaagaaaatcaatgaa
ggttcattctgtacaaaaacagaattatgtaaacaagaacacgttgaaatcctgccaaaa
atttcccgtcgtaatcatatggggcatattaaattaaatagtcctgttgttcacttttga
tttttcaaagtagatcactctattatttacaaacttttaggtttaaaagttgcaaataat
gaagaacctgttaaaagaatcgatttagaaaacctgatttactataaatcacacatcgtt
ttagaatcaggtggtctaaaatcacttcctaaaaatactattattgatattaatgaagct
gcaaatatttataaatcagctttagaagaattaattcaaagatttgaaaaaggcacagaa
gaatatgaagatattcgtgaaactcttgatgatcttgtagaaaaagctacttcaaaaatt
ggtcaagattatggtattgacttttatgaactaaatatggttattgaacattacactgaa
gctaaaattggaactggttcacttgctattgaatatttactaaaaaatattgatttaaag
cacgaaaaagaacttgtaatgcaagaaatcaaacaaatcaatattgatgaagttgaagga
cgttgatcaactacttctaaacaaaaccgtgaaaaattatacaaacgtttacaagtatta
aatgccttcattgaatctggccaaaagccaaccagtatgttgatttataaccttcctgta
attcctgctgatttacgtccattaattcaacttgatggaggaagacattcttcaagtgat
attaatgaactttaccgtcgggtaattattagaaataaccgtctaaaacaatgacaagaa
aaagatgctcctactttggttgttcaaaacgaacttcggatgattcaagaagcagttgat
gctttaattgataaccaaagaagaacaccaagcccagtactttctaaagacaatcgtcca
tttaaatctataagtgacgcattaactggtaaaaaaggtagatttagacaaaacctactt
ggtaaacgtgtggattattctggtcgttcggttattgtagttggccctgaactaaaaatg
caccaatgtggtatcccacgtgaaatggctgctaaattatttgaaccttgaatagtcgaa
agtctaattgacaatggtgaggctacaactgtaaaacaagctaagaaaatgattgaagac
caaaattcagttatttgaccttatgtagctaaagctattgaaggaagactagttctatta
aaccgtgcacctacattgcaccgtttgtcaattcaggcttttgaacctgttttagttcgt
ggtaaagctattaaattgcatccattagtatgtactccatttaacgctgacttcgatggt
gaccaaatggctgttcacgtaccagtttcagaacaagcacttctagaagcacgtgaactt
atgcttgcaaacaaaaacattctaggtcctaaagatggcgaacctatcatcaacccttca
caagatatggttttaggtatctactatctaaccatcgaagaagaaggtgctttgggtgaa
ggtagaatatttgacagttttgaccatatgatgagagtgtatgccgaaagaaaagtatca
cttcacgctcgtgttgctcttcctttatcagaagtaaaggatgcaaaactattcaatata
cctgtttctaaacgtgaatacataatttcaactgttggtaaatttattttcaacaatatc
ttccctagaacattttcattcatttatgataacaatgttgctaaatatacaacgttggaa
caatacaaccaatcaatgtataaatacattgttccatcaggtacaaacattttagaatac
attaaacgtaatttaacaattctacctgcttttaataagaaaaatattgctcgcatcata
agacatatttttgataaatatgttgccacagtttctcttcaaaaagtagcatcagttatt
gctaaaattaatgaaattagctcagatgatattattctagaatacttgtcattaactaac
tatgaagataaaaagattaataaagaacatgctattttattaaatgccttcactcatgaa
gaaatgaaaaagaatgtactttatagtcaagcaaaatcttcttcaacagcacttcacacc
tattcacctgaacaaaaggctaacattttagatagagtttgatttagatatacaaacatt
gttgcttctatattagatgatattaaagacctaggttttgaatattctactatttcaggt
atttcaatttcattttcagatattcttgaaacaaatatgaaatcaaaatacatcaaagaa
ggtgatgattacatcagccaattaagagaatattacaaccaaggtatgattacagatgat
gatcgttataaactaactatcgaaaaatgatccaatgttaaaaataacattcaaaaagaa
cttgaacaaattattaaagaaaatccacaaaacccagttatcacaatgattaactcaggt
gcgcggggaaatatttctaactatgttcaactagctggtatgcggggattaatggctaac
aacattaaaaccacaaaagccgatgctagaaacgataggattgttcgttcaactgttgaa
atgcctgttaaatcttcatttattgaaggacttactgcttttgaattctactcatctacc
cacggtgctagaaaaggtctaacagatactgctcttaacactgctaaatctggatattta
acccgtagattagtcgatgttgctcaaaacatagttgttcgtgaagaaaactgtggatct
gattatggttacattgcttgtactattgttgacactaaaacaaatcaagtaattgtagga
ttgaaagaaagaattgttggtcgttttgctaataaacctattttcaaacaagatggaagt
acattaatcgttccaagaaatgggctaattaccgaaaaaattgctgacattatccttcaa
gaaggatatactgaaattgaaattagatcaattttaggctgcaacacaagaaatggtgta
tgtaaattgtgttttggtaacgatcttgcaaccaatagaatagttaacattggtgaagct
gttggtattattgcagctcaatcaatcggtgaacctggtactcaactaacaatgcgtacc
ttccatactggtggggttgctggtggagaagatattactggtgggtttgctcggctaatt
gaattaattgatgcccacgaacaaccatgaggtcgtcctgcagtaatttcaccttacgaa
ggtaaaattgtaaaaatcgaagaaaacactgaaaacaaaaacattgttagccacatagtt
tatattgaacataaactaagtgatggtgaaattgaaattactcctattgaagtaacttca
aacaaaaaacttagagttagtgaaggttctagtgttcgtattggtcaaaaactttcagaa
gggcctataattctaaaagaattattagaactaacagataccatcactgtccaaaattat
cttctaaaagaaatccaaaagatttatcgtatccaaggtattgcaattagcgataaatat
attgaaatcattattcgtcaaatgatgtcaaaaatcgttatttccaacccgggtgattct
aaattctttgctggtgctattgtagatattttcgactaccaagaagaaaatgctaaccta
ctagctgaaggtaaaaaaccagcttatggaactgtagtaatcaaaggtgctaaacaagta
ccacttctatcagattcattcctttcagctgcttcttaccaagaaacttctaagatatta
gttcatgctgctatttcttcaagaagcgacaaattacttggtctaaaagaaaatattatc
attggtaagaaaatcccagccggaacatcactgttcccatttgaagaaaattctaaatat
gacattcgtccatctattaattacttccgtagtccagaagaagatgaagaaatgacattc
gatagcttcgcaccattagatctagaagaaatcagaaatgaagttgattctgaaactgaa
cctatggtatcagtagaagatgaagaaaaccaagaagaatttatcttcgatgaagaagca
gaagatgatgacgcacaaaatgcagattacgaataa
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