KEGG   Methanomethylovorans hollandica: Metho_0003
Entry
Metho_0003        CDS       T02418                                 
Name
(GenBank) archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B
  KO
K02323  DNA polymerase II small subunit [EC:2.7.7.7]
Organism
mhz  Methanomethylovorans hollandica
Pathway
mhz03030  DNA replication
Brite
KEGG Orthology (KO) [BR:mhz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Metho_0003
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mhz03032]
    Metho_0003
Enzymes [BR:mhz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Metho_0003
DNA replication proteins [BR:mhz03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    D-family DNA polymerases
     Metho_0003
SSDB
Motif
Pfam: DNA_pol_E_B Metallophos Metallophos_2 tRNA_anti-codon CDC24_OB3 tRNA_anti_2
Other DBs
NCBI-ProteinID: AGB48301
UniProt: L0KT75
LinkDB
Position
2618..4171
AA seq 517 aa
MNQIEVITVFLEEGYQISPNAVELICCHCNPRSLLDDVLQNMDPSVLVVDIEHINECINE
RDIQKKYEVPVKAPFSKSSNIIPAQVNPMVSTLTCPQSYNPVDVLLDITDNSTCVGEYME
FVQFFRNRYSRLSEMIRGRLNSRPIESLNKYRNKKGGRREGMDKDMNEVSIIGMISDIKS
TSNGHKMVELEDTTGSISVLIRMADKELFELASCFVLDEVVGITGALTNDGKLLIAKKIT
IPDLPNTLGERKRSYGKAVLTSDVHVGSSTFLEEEWYRFIDFLKGDTDNEVMAELSTEVR
YLVVAGDLVDGVGIYPGQEMELNIPDVYEQYKKTAEYFSEIPKHIKVIISPGNHDAVRQA
EPQPMLPENIRADFSENVLFVGNPSVVDLDGVKLMIYHGRSIDDLVASIPGVSYQEPTKA
MVEMMKRRHLSPIYGSRVSIAPEKQDHFVISQVPDILHCGHVHTVGVEWYKNVLLVNSGT
WQSQTEFQKRVNVVPTPAQVPIVDLSTLKTTILKFAE
NT seq 1554 nt   +upstreamnt  +downstreamnt
atgaatcagatcgaagtgattaccgttttcctagaagaaggatatcagataagcccgaat
gctgtggaattgatatgttgtcattgtaacccacgcagtcttctggacgatgtcctgcag
aacatggacccttctgtgttagtagtggatattgagcatattaatgagtgcattaatgaa
agagatattcaaaaaaaatatgaagtgcctgtaaaagctcctttttctaaaagcagcaat
attattcctgcacaagtaaaccctatggtttccactcttacctgtcctcagtcttacaat
cctgttgatgttttattggacattactgataattcaacatgtgtaggcgaatatatggaa
tttgtccagtttttcaggaatagatatagcagattaagtgaaatgataaggggcaggtta
aattcaagacctatagaaagtctgaacaaataccgtaataaaaaaggcggtcgtcgcgag
ggcatggataaggatatgaatgaagtttccatcattggtatgatctcagacattaagagt
acaagtaatggtcataaaatggtagaacttgaggatactacgggttctatctcagtgctg
ataagaatggctgataaagagctatttgagcttgccagttgctttgtactggatgaagtt
gtgggtattactggtgctcttactaacgatggtaaactgcttatagctaaaaagatcacg
attccagacttacctaatactctgggtgaaagaaaaagatcatacggcaaagctgtcctc
acctctgatgttcatgtaggtagttctacatttttagaagaagaatggtatcgttttatt
gattttctcaaaggtgatactgacaatgaagtgatggctgagttgtccacggaggtacgt
tatcttgttgtggctggagatcttgtagatggagtaggtatttatccgggacaggagatg
gaattaaatataccggatgtatatgaacagtataaaaaaactgcagaatattttagtgaa
ataccaaagcacattaaagttataatatctcctggtaatcatgatgctgtgagacaagca
gaaccacagcccatgctgccggaaaacatacgggcagatttctctgaaaatgtattattt
gtgggtaatccctctgttgttgatcttgatggtgtcaaacttatgatatatcatggtagg
tctattgacgatctggtagcctccatacctggtgtatcctatcaggaacccacaaaggca
atggtggaaatgatgaaaagaagacatctttctcccatttatggcagccgggtatctata
gctcctgaaaaacaggatcattttgttattagccaggtgccagatatactgcattgtggt
catgttcacacagtgggtgtggaatggtacaagaatgttctattggttaattcgggtaca
tggcagtcccagaccgagttccagaaaagagtaaatgtcgtgcctactcctgcacaggtg
cctatagtagacctcagcactcttaagaccactatccttaagtttgctgagtga

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