Methanomethylovorans hollandica: Metho_0039
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Entry
Metho_0039 CDS
T02418
Name
(GenBank) peptide chain release factor eRF/aRF, subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
mhz
Methanomethylovorans hollandica
Pathway
mhz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mhz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Metho_0039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mhz03019
]
Metho_0039
03012 Translation factors [BR:
mhz03012
]
Metho_0039
Messenger RNA biogenesis [BR:
mhz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
Metho_0039
Translation factors [BR:
mhz03012
]
Eukaryotic type
Release factors
Metho_0039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Spectrin_3
DUF4931_C
Motif
Other DBs
NCBI-ProteinID:
AGB48337
UniProt:
L0KSF5
LinkDB
All DBs
Position
44100..45344
Genome browser
AA seq
414 aa
AA seq
DB search
MTEQSAHKKYEFKKKLEELRIKKGRGTELISLYIPPDKQISDITSQLKGEHGQAANIKSK
ITKDNVQGAIESLLARLRYVEVPENGIVFFTGAVDIGANKTNMETTIVEPPQPIVTYRYH
CDSSFYLEPLEEMLKDAKTYGLLVLDRREAAVGLLVGKHIEAHRTLTSTVPGKQRKGGQS
AHRFQQLRLIAIHDFYKRIGDAASDVFMAVDQKNFEGILIGGPSPTKEEFESGEFLHHEM
RKKMLGLFDVAYTDESGLPELVNAASEKLSDIDLIAEKKLIQRFFTELVSDSGKAAYGEE
SVRANLNIGAVEVLLISEDLRAERLTIRCPNGDHEAKLTKDFKPGEDNFVPGPCPVCGYS
MEVIEKVDIVDELSEMADQMNTQVEFISTDFDEGSQLMNAFGGLVAILRFNTGV
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgacagaacaatctgctcataagaagtatgaattcaaaaagaaacttgaggaactcagg
atcaagaaaggtcgtgggacagaactcatttctctatatattccccccgacaagcaaata
tctgatattacctcacagctcaaaggagaacatggccaggcggcaaacattaagtctaaa
atcacaaaggacaatgtgcagggtgctatagagtccttgcttgcaaggctcagatatgtc
gaagttccggaaaatggtattgttttctttacaggtgctgttgatatcggtgctaacaag
actaatatggaaaccactattgtagaacctcctcagccaattgtgacatacaggtaccac
tgtgactctagtttttatctcgagccccttgaagaaatgctcaaggatgcaaagacctat
ggactgctggtgctggataggcgtgaggcagccgtgggcttgctcgtgggaaagcatata
gaggctcatagaaccctaacttccactgtacccggtaaacagagaaaaggtggtcagagt
gcccatagattccagcagttgaggctcattgctattcatgatttctacaaacgtatagga
gatgctgcaagtgacgtgttcatggcagtggaccagaagaatttcgaaggtatacttata
ggtggtccttctcccaccaaagaagagtttgaatcaggagagttcctgcaccatgagatg
aggaaaaagatgcttggtctttttgatgttgcctacacagatgaatccggtcttccggag
cttgtcaacgcagcaagcgaaaaattatcggatatagatctcattgccgaaaaaaaactt
atccagcgtttcttcacagaattggtttccgattcaggtaaagcagcttacggagaagag
tctgtcagggctaatctcaacatcggtgcagtggaagttctcctgatatctgaagatctg
agggcagaacgattgacgatccgatgtccaaatggggaccatgaggcaaaactgacaaaa
gacttcaagcccggagaggacaattttgtccctggaccttgtcctgtttgtggttattcc
atggaagtcattgaaaaggtggatattgtggacgaactttctgagatggcggatcagatg
aacactcaggtggaattcatttcaactgactttgatgaaggttcacaacttatgaatgcc
tttggtggtctggttgctatattaaggtttaatacgggtgtataa
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