Methanomethylovorans hollandica: Metho_0090
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Entry
Metho_0090 CDS
T02418
Name
(GenBank) mismatch repair ATPase (MutS family)
KO
K07456
DNA mismatch repair protein MutS2
Organism
mhz
Methanomethylovorans hollandica
Pathway
mhz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mhz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Metho_0090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhz03400
]
Metho_0090
DNA repair and recombination proteins [BR:
mhz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Metho_0090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
HHH_5
5_3_exonuc
HHH_2
HHH
AAA
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
AGB48384
UniProt:
L0KWP4
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Position
94499..96616
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AA seq
705 aa
AA seq
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MKRKESICSLNDIPGIGEKMARRFIEHFGTEQNALEAILNGDVASISCIEGVGQRYAISL
VQEVNSRIEGVRVQDFLKTRESMDIYERLLDIIKTFAHTGYAREKMHTFFPYPASSRDRI
ESIRISMAQHIEHADMLRGNEVFLSLLSGVKPLNLNQKSMKVRDRVVLTTDPKKLEKIKK
RFGEYVDVHLVSSLTDVVDSARGYSHVITADDDLFSCELPEDVEVEIVPDLEACEEWKIV
PDNEINQVSRNLQVIDCSLQVTRIIREAGMAFLQEVDNVTLDKLEKTICMIDENGDVRAG
TDPEIDRLALILGGIDTAVGSANTFANEELNNALKESQLVLSGQDMLRMMHDNTELQSVL
ENQLRHNYVSVVEKARKHICTTLCLQKKEIFFLDNLFPQTINHPVEADRTQVTVLKQYIK
ERIAKRKIEHKRQVARSLVDMRDTIREIVKEVLNFDVGFTIGCFSSEYGLSLPRIIEGTG
VGLKNAENLFLRSRHGTVVPIDYAVGETSFSHKQDVSRIVLLSGVNSGGKTSLLELLAQC
IILAHMGFPVPAAAMEVGLTDGLYYFAKSKGTLDAGAFETTLIDFSVVADSSGKIVLVDE
LESITEPGASAKIISGILEMLSENEKSLAVFVSHLSGLIMENTQSNVRVDGIEASGLDSD
LNLIVNRTPRYNYVARSTPELIVERLLRKTSGNDHLFYERLKSKF
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcaaagaaagcatatgttctttaaatgacatcccaggcatcggggaaaaaatg
gccagacgtttcatagaacactttggaaccgaacagaatgctcttgaagctatcctaaat
ggtgatgtggcaagcatatcatgcatagaaggtgtaggtcagagatatgcgatatccttg
gtgcaggaggtaaactccaggatagaaggtgttagagtacaggatttcctgaaaacacgc
gagtccatggatatctatgagaggttgctggatattatcaagacctttgcacacacaggt
tatgcaagagagaagatgcatactttttttccttatccggcatccagtcgggacaggata
gaatcgatacggatttcgatggcacaacatattgaacatgctgatatgctcagagggaat
gaagtttttctatctttactaagtggtgtgaaaccactcaatctgaatcaaaaatcgatg
aaagtgcgggaccgggtggtccttaccactgatccaaaaaagcttgaaaagataaagaaa
cggtttggagaatatgtggatgtgcaccttgtaagttcccttaccgatgtagtggattca
gcacggggttattctcatgtcataaccgcagatgacgatctattttcctgtgagttgccc
gaggatgtagaggtagagatagttcctgacctggaagcctgtgaagaatggaagatagtt
cctgataatgagatcaatcaggtttcacgtaatctgcaggtgatagattgttcccttcag
gttacccgaattatcagagaggctggaatggccttccttcaggaagtggacaatgtaact
ctggataaactggaaaaaaccatctgcatgatagacgagaatggggatgtgagggcaggt
acagaccccgagatagatcgtcttgcattaatacttggaggaattgatactgctgtggga
agtgcaaacacctttgccaatgaggaactcaacaatgctctcaaagaaagccagcttgtt
ctcagtggtcaggatatgttaaggatgatgcatgataatactgaactacagtcagttctg
gaaaaccaattgcgtcataattatgtttcagtggttgagaaagccaggaaacatatttgt
acaactctctgtctgcaaaagaaagagatctttttcctggataacttattccctcaaacc
attaaccatcctgtggaggcggacaggacacaggtaactgtcctgaaacagtatattaaa
gagaggatcgcgaaaagaaagatagaacataagaggcaagtggcgcgctctcttgtggat
atgcgcgatactatccgagaaatcgtgaaagaagtattgaatttcgatgttggttttact
attggttgtttttcttcagagtatggtctttctcttcccaggattatagaaggaaccgga
gtgggtttgaaaaatgcagagaacctcttcctcagatctaggcatggtacagttgtacca
attgattatgcagttggtgagacatctttcagccataagcaagatgtgagcagaatagtc
ctcctcagcggagtaaactcggggggtaagacctcacttcttgaattgctggcacaatgt
attatccttgcccacatgggctttcccgtacctgcggcagccatggaggtaggactgact
gatgggttgtactattttgccaaatccaagggcactctcgatgcaggagccttcgagaca
acactgatcgatttttcagtggttgctgatagttcaggaaagatcgtgcttgtggatgag
ctggagtcgatcacagaaccaggtgcttctgccaaaatcatttccggtattctggaaatg
ctttcagagaacgagaaaagcctggcagtgttcgtgtcgcatctttcagggctcattatg
gaaaatacacaaagtaatgtaagggtggacggtatcgaagcaagcggtctggacagtgac
cttaatctaattgtgaatcggactccccgttacaattatgtagcaagaagtacaccggaa
ctaatagtagaaaggctgctgcgcaaaacaagtggcaatgatcatctcttttatgagagg
ctgaaaagtaagttttga
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