KEGG   Methanomethylovorans hollandica: Metho_0147
Entry
Metho_0147        CDS       T02418                                 
Name
(GenBank) flap structure-specific endonuclease
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
mhz  Methanomethylovorans hollandica
Pathway
mhz03030  DNA replication
mhz03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mhz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Metho_0147
   03410 Base excision repair
    Metho_0147
   03450 Non-homologous end-joining
    Metho_0147
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mhz03032]
    Metho_0147
   03400 DNA repair and recombination proteins [BR:mhz03400]
    Metho_0147
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mhz04147]
    Metho_0147
DNA replication proteins [BR:mhz03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Metho_0147
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     Metho_0147
DNA repair and recombination proteins [BR:mhz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Metho_0147
Exosome [BR:mhz04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   Metho_0147
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc HHH_5 HHH_2
Other DBs
NCBI-ProteinID: AGB48434
UniProt: L0KWU0
LinkDB
Position
complement(152803..153819)
AA seq 338 aa
MGTDIGELLKKQQVEISELSHKVVAVDAYNTLYQFLSIIRQRDGTPLKDSRGNITSHLSG
ILYRMTSLMEEGIKPVFVFDGKPSHLKARTIEKRTADREKATIKWEEAKSKGLAEEAYMY
AQASSRVTHEIVEDSRKLLVAMGIPWVDAPSEGESQAAHMVKRGDANYVASQDYDSLLFG
ASFVVRNLTITGKRKLPKKNIFVDVKPEIMELGENLAELEIDQSQLIEIALCVGTDYNRG
LEKIGPKKALKLIKEHRSIEKVLQAVGQNIEDLQEIKDLFLNPSVTDNYTLKWKKPDTDA
IVEFLCQGHDFSKERVIKACERLEKISGPGQRTLDQWF
NT seq 1017 nt   +upstreamnt  +downstreamnt
atgggaacagatattggagagcttctaaagaaacagcaagttgaaatatccgaattgtcc
cataaagtagtggctgtagacgcatataatactctttatcagtttcttagtataataaga
cagagagatgggacccctcttaaggattccagagggaatattacctctcatctgtcgggc
attctttatcggatgaccagccttatggaagaaggaattaaaccagtatttgtttttgat
gggaaaccatcgcatcttaaagcccggactatagagaagcggacggctgacagagagaaa
gcaacaataaaatgggaagaagcaaagtctaaaggattagcagaagaagcatatatgtat
gcacaggcttcctccagggtcacccatgaaattgttgaagattccagaaagcttcttgtg
gccatgggcattccctgggttgatgccccctctgaaggagagagccaggctgcccacatg
gtgaaaagaggagatgcaaactatgtggcctcgcaggactatgattcattgcttttcgga
gcttcttttgttgtgaggaaccttacaataactggtaaacgtaaattgccaaagaaaaat
atttttgtggatgtgaaacctgaaataatggaactcggggaaaatctggcagaactggag
atcgaccagtcacaacttatagagattgcattatgtgtagggacagattacaaccgcgga
cttgaaaagatcggaccaaaaaaagcattgaaacttataaaagagcataggagcattgaa
aaagtgttgcaggcagttggacagaatatagaggacctgcaggagataaaagatcttttt
ttaaatccttctgtaacagacaactatactctcaaatggaaaaaacccgacactgacgca
attgttgaattcctttgccaggggcatgacttttcaaaagaaagggtcattaaagcctgt
gaaagactggaaaagattagcggacccgggcagagaaccctggaccaatggttctag

DBGET integrated database retrieval system