Methanomethylovorans hollandica: Metho_0286
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Entry
Metho_0286 CDS
T02418
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mhz
Methanomethylovorans hollandica
Pathway
mhz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mhz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Metho_0286
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mhz03019
]
Metho_0286
03400 DNA repair and recombination proteins [BR:
mhz03400
]
Metho_0286
Enzymes [BR:
mhz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Metho_0286
Messenger RNA biogenesis [BR:
mhz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Metho_0286
DNA repair and recombination proteins [BR:
mhz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Metho_0286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
AGB48562
UniProt:
L0KT01
LinkDB
All DBs
Position
complement(275534..277612)
Genome browser
AA seq
692 aa
AA seq
DB search
MHRTLRKYFGYDTFRPLQEDIIKDVIAGKDVFVLMPTGGGKSICYQLPALLMNGVTVVVS
PLISLMKDQVDTLRANGVEAAYLNSTLSYKESNQIKQELENNIIKLLYVAPERLTLSSTL
TLLDRIKVNLFAIDESHCISEWGHDFRPEYRKLSILKRKYPHIPIIALTATATPKVRKDT
ISQLHIEDCNTYVASFNRKNLLYQVRPKKETYEQIVEFLRKRKDKSGIIYCQSRKTVDEL
TGKLRKSGFNALPYHAGLSDAARSRNQDIFIKDDAEIIVATIAFGMGIDKPNVRFVIHYD
LPRNLESYYQETGRGGRDGLECECILFFSRGDKYKIDYFIDQIAKSEEREAARLKLKEVM
DYCQSTICRRKMLLRYFGEELQEENCGGCDVCLQPVKITDATEEAKLLIRCVKEVSQRYG
ITHVTEILTGSNSKKITEKGHHRLSSYGTGTYLPKDRWADIARELAHQGILRLEGSRYPL
LKLDKDSEQVIAGKRTVEMIQLASSNDSLLALGKQIATDQLKKPKASDHQSDLARVKEIE
TEYITKKQTGTVNRIDNELFSRLKELRKKIASKEGVPPYIVFADTSLKQMATQMPLNEKE
LLEITGVGEYKLQKYGDMFLTEIRDHLKGTSKDSIEATTQEVETEEDKKEKVIQCIMGLR
EELIRLTKEQLGTEMPDKYIQEVWSDILVYKK
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgcaccggacattaagaaagtacttcggatacgatacattcagacccctgcaggaagat
atcataaaggatgtaattgcaggaaaagatgtttttgtgttgatgcccaccggaggagga
aaatctatctgttaccagttacctgcacttctgatgaacggtgtcactgtggtagtatca
ccactcatttcccttatgaaggaccaggtggatacactccgggccaatggtgttgaagca
gcatacctgaacagtacattaagttacaaggaaagcaatcagataaagcaggaacttgaa
aacaacattatcaaactgctgtatgttgctcctgaaaggcttaccttgtccagtacattg
acgctgcttgacagaataaaagtaaacctgttcgctatagatgaaagtcattgcatatct
gagtggggacatgatttcagacctgagtacaggaaactcagcattcttaaaagaaaatat
ccgcacatccccatcatagcacttactgcaaccgctactcccaaggtacggaaagacaca
atatcccagttgcacattgaagattgcaatacatacgtcgcaagtttcaaccgtaaaaat
cttctttatcaggtcagaccaaagaaagagacctatgaacagatcgtggaattcctgcgg
aaaagaaaggataaaagcggtatcatatattgccagagccgcaagaccgtagatgaacta
acgggaaaattgcgtaaaagcgggttcaatgccctgccttatcatgcagggctctccgat
gctgcaaggagcaggaaccaggacattttcataaaagacgatgcggagatcatcgttgct
accattgcttttggtatggggatagataaacccaacgtccgctttgttatacactacgac
cttccgcgcaatcttgaaagctattaccaggaaacaggaaggggtggcagggatggtctt
gaatgcgaatgtatactatttttcagccgcggtgacaagtataagatagattatttcatc
gaccagatagcgaaaagtgaagagcgtgaggcagccaggttaaaactcaaagaggtaatg
gactactgccagagcacaatatgcagaaggaaaatgctgctgcgttattttggtgaagag
ctgcaagaggagaactgcggaggatgtgatgtatgcctgcagcctgtgaaaataactgat
gctacggaagaagcaaagctgctcatcagatgcgtgaaggaagtaagccagaggtatggt
atcacacatgtaacggagatacttaccggatcaaatagcaaaaagataactgaaaaaggg
catcataggctgagcagttatgggacgggcacttatcttccaaaggacaggtgggcagac
attgcaagagaactggcccatcagggaatattaaggctcgaaggttctagatatcctttg
ctcaaactcgacaaagatagtgaacaggtcattgcagggaaaagaactgtagagatgata
caattagcatcaagcaacgattcactcttggctttgggtaagcaaatagcgacagaccaa
ctgaaaaaacccaaagcaagtgaccatcaaagcgatcttgcgagagttaaagaaatagaa
accgaatatataacaaagaaacaaactggaactgtcaatagaatagataatgaactgttc
tcaaggttaaaggaactgcgtaaaaagatcgcaagcaaagagggagttccaccttatatc
gtgtttgcagatacgagcttgaaacagatggcaacccagatgcccctgaacgaaaaagaa
ctgctggagatcaccggcgtgggagaatacaagctacagaaatacggagatatgttcctg
acagaaataagagatcatctgaaaggtacttcaaaagatagcattgaagcaactacacag
gaagttgaaactgaagaagataagaaagaaaaagtgatccagtgcataatgggccttcgg
gaagaattaatcaggttaacaaaagagcaactgggaacagagatgcctgataaatatata
caagaggtctggtcagacatcctggtttataaaaagtaa
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