Methanomethylovorans hollandica: Metho_0342
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Entry
Metho_0342 CDS
T02418
Name
(GenBank) PKD domain protein
Organism
mhz
Methanomethylovorans hollandica
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Disaggr_repeat
PKD_4
K319L-like_PKD
PKD
Disaggr_assoc
InlK_D3
Beta_helix
Y_Y_Y
He_PIG
Bact_surface_Ig-like
Big_13
DUF8818
NPCBM
Motif
Other DBs
NCBI-ProteinID:
AGB48615
UniProt:
L0KV87
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Position
333389..338227
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AA seq
1612 aa
AA seq
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MDNISFNFFERFSAHRWAKSRHVLLIALWLKSYFFSTKALSTKYNFSRNKNNTTFKKISS
SVLGLIFCFLCFSVVGSGLSSAATVYVAADGSGDYNCNGTNDHVEINEALAYIKSTGGGT
VYLKGPNTYWIDSTLNIGSNIKLTGDSTAEIKLVPKAGWSSGVPMIRGETRASNIVITGF
TIDGNSENQGVSFGRGYYDLIYLERSNNVEVSHMLLEWGCNDGLKIKWGNNVVFTHNNVY
KMGHDAFYALYYNTGEVAYNTVFTRTNSACRLSGGVSDFTVHDNTFYSDGGGTSTGPAIE
IDKTGSSGTLSFNNIDIYNNKIHSIRGSGIWMFAAYTDNVIRAKNVHIHHNTFTKVGQHA
LNTGYTNAAITMQNFDNTIIENNVFDDGGNAAIKWYAWSPIPQQKAQFTTYVRNNIIKNN
DGMSGVPGSGVGIWNTQPSYAKFILQNNEFYNNKNGATNAPVANGGADKTVTVESPVTFD
ASASTDDIGIVSYSWDFDASNGITSEATARTTTKTYATAGTYTVTLTVTDTTGQKATDRV
TVVVNAATTTTAPSIPPSTTTPSTIPSQADAAPVANGGADKTVTVGSPVAFDASASTDDV
GIASYSWDFDASNGITSEATARTATKTYATAGTYTVTLTVTDTTGQKATDRVTVVVNVAT
TTTAPSTSTTTPAVPTKVDTVPVANGGADKTITVGSPVTFDASASTDDVGIVSYSWDFDA
SNGITSEATARTATKTYTTAGTYTVTLTVTDTTGQKATDRVTVVVRAATTTTAPSTTTPA
VPTKVDTVPVANGGADKTVTVGSPVTFDASASTDDVGVASYSWDFDASNGITSEATARTA
TKTYATVGTYTATLTVTDTTGQKATDRVTVVVNAATTTTAPSTTTPTTPTSPAGSVSYSP
TYDNGLRTSSPTSVFSTMNYIDIGASSASCRDLMMFDLSNYKTTDVISKATLSLYWYYPA
TTRTSDTVVQIYRPAADWDPRYVSWTNRASGTSWTTAGGNWYDKNGAAQGSTPYASVTFA
ASTVPGNRYYDFDVTQLVQEYVSGKFKNTGFFLKARTESGNYIAFYSSEWSNAAQRPKLT
VSTGQSSSSTVLSHADAAPVANGGADKTITVGSPVTFDASASTDDVGIASYSWDFDASNG
ITSEATARTATKTYTTAGTYTATLTVTDTTGQKATDRVTVVVNAATTTTAPSTTTPTPAV
PTKVDTVPVANGGADKTVTVGSPVTFDASASTDDVGIASYSWDFDASNGITSEATARTAT
KTYATAGTYTATLTVTDTTGQKATDRVTVVVRAATTTTAPSTSTTTPAVPTKVDTVPVAN
GGADKTVTVGSPVAFDASASTDDVGIASYSWDFDASNGITSEATGRTTTKTYTTAGTYTV
TLTVTDTTGQKATDRVTVVVNAATTTTAPSTTTPTTPTSPAGSVSYSPTYDNGLRTSSPT
SVFSTTNYIDIGASSASCRDLMMFDLSKYKTTDKISKATLSLYWYHPSDTTRASDTVVEI
YRPAADWDPGYVSWNNRASGTLWTTAGGNWYDRNGAAQGITPYASVTFPARAVPGNRYYD
FDVTQLVQEYVSAKYKNTGFFLKARTEGGNYIAFYSSEWSNAAQRPKLTVTI
NT seq
4839 nt
NT seq
+upstream
nt +downstream
nt
atggataacatcagtttcaactttttcgaaagatttagtgcccacaggtgggctaaatcc
cgtcatgtgttgctgattgctttatggttgaaaagttatttcttctcgacaaaagcttta
tctacaaaatacaatttctctagaaataaaaacaacaccacctttaaaaaaatctcttcc
tctgttcttggcttgatattttgttttctgtgtttttcagtagtcggatccggtctatct
tcagcagcaacggtatatgtcgctgcggatggaagtggcgactacaattgtaacggaacg
aacgatcacgttgaaataaatgaagcacttgcatacataaaaagtactggtggcggtact
gtttatcttaagggtccaaatacatactggatagatagcactcttaatatcggttcaaac
ataaaactcacaggtgactcaaccgctgaaataaaacttgttccgaaggcaggctggtcc
agcggtgttccaatgatccggggtgaaaccagagcaagtaatatcgtaatcactggcttt
actatcgatggaaatagtgaaaaccagggtgtttcttttggaagagggtattatgatcta
atatatttagaacgttctaataacgtagaagtatctcacatgcttcttgagtggggatgc
aatgatggattaaaaattaaatggggcaacaacgttgtttttactcacaacaatgtgtac
aaaatgggtcatgatgctttttatgcactttactataatacaggtgaagttgcatacaac
actgtcttcacacggacaaatagtgcgtgcaggttatccggtggtgtatctgattttact
gtccatgacaatacattctattctgacgggggcggcacatcaacaggaccggcaatagag
atagacaaaaccggtagctcaggaactttatcctttaataatatagatatatataataat
aagatacacagcataaggggttcaggtatctggatgtttgcagcatatactgacaatgtc
atacgggcaaagaacgtccatatacatcacaatacatttacaaaagtaggccaacacgct
ttaaataccggatataccaatgcagcgatcacaatgcagaattttgataatactatcatc
gagaataatgtatttgatgatggtggtaatgctgcaataaaatggtatgcatggtctccg
attccacagcaaaaggcacagttcaccacctatgttaggaacaatataataaagaacaat
gatggaatgagtggagttccaggctcaggagtgggtatatggaatacacagccatcctat
gcaaagttcatacttcagaacaacgagttttacaacaataagaatggtgctactaatgct
ccagttgcaaatggcggagctgacaaaaccgtaactgttgaatcacctgtcactttcgat
gccagtgcatctactgatgatatcggcatagtttcttactcctgggatttcgatgcatca
aatggcataacctctgaagctacagctaggacaactacaaagacatatgcaacagcagga
acgtatactgtgacgcttactgttacggatacgactgggcagaaagccacagacagagta
actgtagttgtgaatgcagcaacaactaccactgctccatctataccaccatctacgacc
actccctctacaattcccagccaggcagatgctgctccggttgcaaatggcggagctgat
aaaaccgtaactgttggctcacctgtcgctttcgatgccagtgcatctacagatgatgtt
ggcatagcttcttactcctgggatttcgatgcatcaaatggcattacatctgaagctaca
gctaggacagctacaaagacatatgcaacagcaggaacgtatactgtgacacttactgtt
acggatacgactgggcagaaagccacagacagagtaactgtagttgtgaatgtagcaaca
actaccaccgctccatctacatctacaactacacctgcagttcccaccaaagtagatacc
gttccagttgcaaatggcggagctgataaaaccataactgttggctcacctgtcactttc
gatgccagtgcatctacagatgatgttggcatagtttcttactcctgggatttcgatgca
tcaaatggcataacctctgaagctacagctaggacagctacaaagacatacacaacagca
gggacgtatactgtgacacttactgttacggatacgactgggcagaaagccacagataga
gtaactgtagtcgtgagggcagcaacaactaccaccgctccatctacaactacacctgca
gttcccaccaaagtagataccgttccagttgcaaatggcggagctgataaaaccgtaact
gttggctcacctgtcactttcgatgccagtgcgtctacagatgatgttggcgtagcttct
tactcctgggatttcgatgcatcaaatggcattacatctgaagctacagctaggacagct
acaaagacatatgcaacagtaggaacgtatactgcgacacttactgttacggatacgact
ggacagaaagccacagacagagtaactgtagttgtgaatgcagcaacaactaccaccgct
ccatctacaactacaccaactacaccaacatctccagcaggatcggtctcatattctccg
acgtatgacaatggtctgcggacttcatcccctaccagtgttttctccactatgaactat
attgatattggagcgagttcagctagttgcagggatctgatgatgttcgatctgagtaac
tacaaaacaacagatgtaatctcaaaggctaccctctcactatactggtattatcctgct
accacacgtacttcagatacagtggtacagatctacagaccagcagctgactgggatcca
agatatgtaagctggacaaaccgcgcatccggcacttcatggaccacagcaggaggaaac
tggtatgacaagaatggagcagcccagggcagtacaccgtatgcatccgttacattcgca
gctagcacagtgcccggtaacaggtactatgatttcgatgtaactcagctggtacaggaa
tatgtgagtggcaagttcaagaacaccggatttttcctgaaggccaggacagagagcggc
aattacattgctttctacagctcagaatggtctaatgctgcacagagacctaagttaaca
gtttcaacaggtcaatccagcagttcaacagttctcagccatgcagatgctgctccagtt
gcaaatggcggagctgacaaaaccataactgttggctcacctgtcactttcgatgccagt
gcatctacagatgatgttggcatagcttcttactcctgggatttcgatgcatcaaatggc
attacatctgaagctacagctaggacagctacaaagacatacacaacagcaggaacgtat
actgcgacacttactgttacggatacgactgggcagaaagccacagacagagtaactgta
gttgtgaatgcagcaacaactaccaccgctccatctacaactacacctacacctgcagtt
cccaccaaagtagataccgttccagttgcaaatggcggagctgacaaaaccgtaactgtt
ggctcacctgtcactttcgatgccagtgcatctacagatgatgttggcatagcttcttac
tcctgggatttcgatgcatcaaatggcattacatctgaagctacagctaggacagctaca
aagacatatgcaacagcaggaacgtatactgcgacacttactgttacggatacgactggg
cagaaagccacagacagagtaactgtagtcgtgagggcagcaacaactaccaccgctcca
tctacatctacaactacacctgcagttcccaccaaagtagataccgttccagttgcaaat
ggcggagctgataaaaccgtaactgttggctcacctgtcgctttcgatgccagtgcatct
actgatgatgttggcatagcttcttactcctgggatttcgatgcatcaaatggcataacc
tctgaagctaccggtaggacaactacaaagacatacacaacagcaggaacgtatactgtg
acacttactgttacggatacgactgggcagaaagccacagacagagtaactgtagttgtg
aatgcagcaacaactaccaccgctccatctacaactacaccaactacaccaacatctcca
gcaggatcggtctcatattctccgacctatgacaatggtctgcggacttcatcccctact
agtgttttctccactactaactatattgatattggagcgagttcagctagttgcagggat
ctaatgatgttcgatttgagtaagtataaaaccacagataaaatctccaaggctactctc
tcactatactggtatcacccatcagataccacacgtgcttcagacacagtggtagagata
tacaggccagctgctgactgggatcccgggtatgtaagctggaacaaccgtgcatctggt
actctatggaccacagcaggaggaaactggtatgatcgaaacggagctgctcagggcatt
acgccgtatgcatccgttacattcccggcccgggcagtgcccggtaacaggtactatgat
ttcgatgtcactcagctggtgcaggaatatgtgagtgctaagtacaagaacaccggtttc
ttcctcaaggccaggacagagggcggtaattatattgcattctacagttctgaatggtcc
aatgctgcacagaggccaaagttaactgtgaccatctga
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