Methanomethylovorans hollandica: Metho_0627
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Entry
Metho_0627 CDS
T02418
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
mhz
Methanomethylovorans hollandica
Brite
KEGG Orthology (KO) [BR:
mhz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhz03400
]
Metho_0627
Enzymes [BR:
mhz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Metho_0627
DNA repair and recombination proteins [BR:
mhz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Metho_0627
Prokaryotic type
Metho_0627
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AGB48884
UniProt:
L0KY33
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All DBs
Position
635331..636689
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AA seq
452 aa
AA seq
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MYHKVLFIFRRDLRIDDNTGLIEALHSSHTVLPCFIFDPRLLEDGKYSKNALQFMLGSIK
DLEAQLNALGGRLYLFSGLPHEVTAKLIGEENIDAVIVNHDYTPFSVHRDGAISAVCAEH
GSEFHQFHDATLQVPGSVKTQQGKMYQVFTQFFRAASKLQVEVPVPVKKGAFFNSDVSGA
LEIIPEFDHNNQELFVHGGRSNALEVLSDLSGFMDYDRLRNIPSRMGTTGLSAHNRFGTV
SIREVYHSFMDELGPDHTLISELYWRDFFIQLAAGHPRVFGRAFREKFDGLQWDNDPVRF
QAWCEGSTGFPIVDAGMRQLATTGYMHNRVRMIVASFLVKDLHIDWRWGERYFARKLVDY
DPCVNNGNWQWAASTGADATPYFRIFNPWLQQQKFDPECEYIKKWVPELRNMSSQDIHAL
EKHIPPQGIGYPPVIVDHKAEKDKTLIMFRSV
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
ttgtatcataaagtacttttcatcttcaggcgggatctgcgtatagatgataataccggc
ctgatcgaggctcttcactcttcacatacagtattgccttgttttatctttgatcccagg
ttgctggaagatggtaaatacagtaagaatgctctgcaattcatgctggggtccatcaag
gacctggaagctcagcttaatgcactgggtggcaggttgtatctgttttcaggtttacct
catgaggtcactgcaaagctgatcggtgaagagaatatagatgctgttattgtgaaccat
gactatactccattcagtgttcacagggatggggcgatatctgcagtgtgtgcagagcat
ggatcagagttccatcagttccatgatgcaacactccaggtgccaggttctgtgaaaact
cagcagggaaagatgtatcaggtatttacacaattcttcagggcagccagcaagctccag
gtggaggtgccagtgccagttaagaagggtgcattctttaattcagacgtctcaggtgcc
cttgagataattccagaattcgatcacaataatcaagaactgtttgtacatggcgggcgc
agcaatgcgctggaagtgctgtccgatctgagcgggtttatggattacgacaggctgcgt
aacatcccttccaggatgggtactaccggcctttcggctcataacaggttcggaacagtt
tccatccgggaagtctaccattctttcatggacgagcttggacctgaccacactctgatc
agtgagctttactggagggatttcttcattcagcttgctgctggtcatcccagggtattc
ggacgcgctttcagggaaaagttcgatggacttcagtgggataatgaccccgtaagattc
caggcctggtgcgagggcagcacaggttttcctatagtggatgccggaatgcggcagctt
gctactaccggttatatgcacaacagggtaaggatgatagtggcttcttttcttgtgaag
gacctgcacatcgactggcgatggggtgaacgatactttgcccggaagcttgtggattat
gatccgtgtgtcaacaatggcaactggcagtgggcagcatccacaggtgcggatgcaact
ccatatttcaggatcttcaatccctggctgcagcagcagaaattcgatccagagtgtgaa
tacattaagaaatgggtgcctgaactgaggaacatgagctcgcaggacatccatgctctg
gagaaacatatcccgccacagggtatcggatatcctccggtgattgtagaccataaggcg
gagaaagataaaacgcttataatgttcagatcggtatga
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