KEGG   Methanomethylovorans hollandica: Metho_1278
Entry
Metho_1278        CDS       T02418                                 
Name
(GenBank) transcription initiation factor TFIIIB, Brf1 subunit/transcription initiation factor TFIIB
  KO
K03124  transcription initiation factor TFIIB
Organism
mhz  Methanomethylovorans hollandica
Pathway
mhz03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:mhz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    Metho_1278
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mhz03021]
    Metho_1278
Transcription machinery [BR:mhz03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     Metho_1278
 Prokaryotic type
  Archaeal type
    TFB
     Metho_1278
SSDB
Motif
Pfam: TFIIB Zn_Ribbon_TF Sigma70_r4 Zn_ribbon_3 Cas12f1-like_TNB DUF7577 Zn_ribbon_LysW Lar_restr_allev A2L_zn_ribbon Zn_ribbon_PaaD Ribosomal_S27e FtrD-like Trm112p Zn_ribbon_IS1595 DZR HTH_Tnp_ISL3 Zn_ribbon_8 PolC_DP2_central HTH_AsnC-type BRF2-like_C_cyclin_rpt DUF5817 DUF5795 Zn_ribbon_Elf1 HypA Zn_ribbon_Brz
Other DBs
NCBI-ProteinID: AGB49501
UniProt: L0KWI3
LinkDB
Position
complement(1268259..1269272)
AA seq 337 aa
MVEVERVRYSDTSEREKIRAMIKARKEKEQNAEVENATVQCPECGSRNLVQDYERAELVC
SECGLVVDAEFVDEGPEWRAFDHDQRMKRSRVGAPMTYTIHDKGLSTMIDWRNRDSYGKS
ISSKNRAQLYRLRKWQRRIRVSNATERNLAFALSELDRMASALGLPRTVRETAAVVYRKA
VDKNLIRGRSIEGVAAAALYAACRQCSVPRTLDEIGEVSRVSRKEIGRTYRFISRELSLK
LMPTSPIDYVPRFCSGLNLKGEVQSKGVEILRQASEKELTSGRGPTGVAAAAIYIASILC
GERRTQREVADVAGVTEVTIRNRYKELAEELDIEIIL
NT seq 1014 nt   +upstreamnt  +downstreamnt
atggtcgaagtcgaaagggtacggtattcagacacttctgaaagagaaaaaatacgtgca
atgataaaagcacgtaaagagaaagaacaaaatgcagaagttgagaatgcaacggtccag
tgtccggaatgcggtagccgcaatctcgtgcaggactatgaaagagctgaacttgtgtgt
tctgaatgtggtcttgtagtggatgcggaattcgtggatgaaggacctgagtggcgtgct
ttcgatcacgaccagagaatgaaacgctcccgtgtgggcgcacccatgacatataccata
catgacaagggtctgtccacaatgatcgactggaggaaccgcgattcttatggaaaatct
atttcctccaagaacagggcacagctttacaggttaaggaaatggcagcgcaggataaga
gtcagtaacgccactgaaaggaacctggcctttgcgttatcagagcttgataggatggca
tcggctcttggtcttcccagaacggtgcgtgaaacagctgctgtcgtgtacagaaaagca
gttgacaagaaccttatccgtggaagaagtattgaaggtgtggccgcagctgccttatat
gcagcatgtcgccagtgcagtgtgccaaggacacttgatgagatcggagaggtttcaagg
gtcagcaggaaagagatcgggaggacctataggttcatttccagagaactttcccttaaa
ttaatgcccacttcacccatcgattatgtcccaaggttctgctcaggccttaatcttaaa
ggtgaggtgcagtccaagggagtggagattctgcggcaggcttccgagaaagagcttacc
agcggtcgagggccaacaggtgtagctgcagctgcaatctatatcgcatctattctctgt
ggtgagagaaggacccagagagaagtcgcagatgtagcaggcgttaccgaggtcactatc
cgcaacaggtacaaagaactggccgaagagctggacatagagatcattctctaa

DBGET integrated database retrieval system