Methanomethylovorans hollandica: Metho_1844
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Entry
Metho_1844 CDS
T02418
Name
(GenBank) uracil-DNA glycosylase, family 4
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
mhz
Methanomethylovorans hollandica
Pathway
mhz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mhz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Metho_1844
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhz03400
]
Metho_1844
Enzymes [BR:
mhz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Metho_1844
DNA repair and recombination proteins [BR:
mhz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Metho_1844
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DUF6284
Motif
Other DBs
NCBI-ProteinID:
AGB50024
UniProt:
L0L178
LinkDB
All DBs
Position
1836450..1837040
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AA seq
196 aa
AA seq
DB search
MNRNCNTPAMNSGELVKLGLKGITARVLECKKCPLHENATNKVIIRGSERPKVLFIGEAP
GKNEDESGIPFCGRAGKVLDELIDYMALEENEYAIINTVKCRPPNNRKPTHSELKTCRPF
LLAQIELLDPEVIILLGNTAEQAFCVSPLKWGEAVNMQEGKYLVKLYHPAALLYRRSLME
QQKEMIDLNKKLWQKI
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgaatagaaactgcaatacacctgctatgaactcgggtgaactggtaaaactgggactt
aagggcataactgccagggtactggaatgtaagaagtgccctctacacgaaaatgcaacc
aataaggtaataattagaggttccgaaagaccaaaggtgctgttcattggagaagctccc
gggaaaaacgaagatgagtccggcattcctttctgcggaagggcaggaaaagtactggat
gaacttatagattacatggcccttgaagagaacgaatatgccataatcaatactgtcaaa
tgccgtcctccgaacaacagaaagccaacgcacagcgagcttaagacatgcagacctttt
ctgcttgctcagatagagctgcttgatcctgaagtgatcatactgctgggcaatacggca
gaacaggcattttgtgtttcaccgctgaaatggggtgaagctgtgaacatgcaggagggt
aaatacctggttaagttgtaccatcctgcagccctgctttacaggcgctcccttatggaa
caacagaaagaaatgatcgatctgaacaaaaagctctggcagaaaatatga
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