Methanomethylovorans hollandica: Metho_1918
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Entry
Metho_1918 CDS
T02418
Name
(GenBank) DNA-directed RNA polymerase, beta subunit/140 kD subunit
KO
K03045
DNA-directed RNA polymerase subunit B" [EC:
2.7.7.6
]
Organism
mhz
Methanomethylovorans hollandica
Pathway
mhz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mhz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Metho_1918
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhz03021
]
Metho_1918
Enzymes [BR:
mhz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Metho_1918
Transcription machinery [BR:
mhz03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Metho_1918
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
Motif
Other DBs
NCBI-ProteinID:
AGB50094
UniProt:
L0L1D9
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All DBs
Position
1910634..1912250
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AA seq
538 aa
AA seq
DB search
MSEAYFTRDKIVQHHIDSYNKFLESGLQNIINEQGIIETDIEDVYIKLGNIRVEKPVVKE
ADGAIEKLYPNEGRLRNLSYSAPIFLQMSVVQGEEESEPVEAKIGQLPVMIKSSICNLVE
LNEKEMIDYGEDPLDPGGYFIVNGTERVVMTLEDLAPNKILTEYGERYGDMIEVAKVFSQ
RRGYRALVVVERGRKSLLEVSFPSISGRINFITLMRALGVETDQDLVNTVSSDPEIMKFM
LENLEEAEVATTREAIEKIGTRVAAGQARDYQMKRANYVMDRYLLPHLGNEPKDRFAKAY
FIGRMAESCFELALGKRSEDDKDHYSNKRLKLTGDLMEDLFRVAFNRLARDVKYQLERAN
MRNRELNVVTLVRADVLTDRLQHPLATGNWVGGRTGVSQLLDRTDYISTLSHLRRVISPL
SRAQPHFEARDLHPTQWGRLCPSETPEGPNCGLVKNFAQMVELSTGIDDKSVLKKVLLDL
EVKPNIPHHLLEKVVEYDTELEEYTEEFDTIPHEEEKPDLGYTDYSDMDDGMGGFADD
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagaggcatattttaccagggacaaaatagttcagcaccatatcgactcttataat
aaattccttgaaagtggtctacagaatattattaacgaacaaggaataattgagaccgat
atagaagacgtatatattaaactagggaacatcagagtggagaagcctgtagtaaaagaa
gcggatggagctattgaaaagttatatccgaacgaaggaagattgcgcaatctttcctat
tcagctcccatattcctgcagatgagcgtagtgcagggggaagaagaatctgaacctgtg
gaagcaaagatcgggcaattacccgtaatgataaaatcctcaatatgcaaccttgtggaa
ctcaatgaaaaagaaatgatagattatggcgaggacccacttgatcccggaggatatttc
atagtgaacggtaccgaaagggttgttatgacccttgaagacctcgcccctaacaaaata
ctgacggagtatggcgagagatatggcgacatgatagaagttgccaaggtattctcccaa
agaagaggctatagagctctcgtagtagtggaaagaggacgcaaatccctactggaagta
tctttcccatcgatatcaggccgcatcaattttataactttaatgagagcattgggagtg
gaaactgaccaggatcttgtaaatacagtgtcaagcgaccctgagatcatgaaattcatg
ctcgaaaacttggaagaggcagaagtagccactacccgtgaagccattgaaaagataggc
acaagggttgcggcaggtcaggcccgtgattaccagatgaaacgtgcaaactatgtaatg
gatagatatttgctgcctcaccttggaaatgaacctaaggacaggttcgcaaaggcatat
ttcattggaaggatggctgaatcctgctttgaacttgcccttgggaagcgttccgaagat
gataaggaccactattccaacaaaaggctaaagctgacaggtgatctgatggaagacctt
ttcagagtagcgttcaatcgcctggccagagatgtaaaataccagctggaaagagctaat
atgaggaaccgtgagttgaacgtggtaacccttgtcagggccgatgtacttactgacaga
ttacaacatcctcttgcaacaggtaactgggtggggggcagaacaggtgtgtcccagctt
ttggacagaacagattatatttcaaccctttcacacctcagacgtgtgatctcccctctc
tcaagagcacaacctcactttgaggctcgtgatttgcatcccacacaatggggaagatta
tgcccatctgaaactccggaaggacctaactgtggactagttaagaattttgcccaaatg
gtagaattatctactggtattgatgataaaagcgttcttaagaaagtacttctcgatctg
gaagtaaaaccaaatatcccacatcatctactggaaaaagtggtggaatatgacacagaa
cttgaagagtatactgaagaatttgatacaattccacatgaggaagagaagcctgattta
ggatataccgactattcagatatggatgatggaatgggaggctttgcagatgactga
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